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rad54b.L RAD54 homolog B L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 432195, updated on 17-Aug-2024

Summary

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Official Symbol
rad54b.L
Official Full Name
RAD54 homolog B L homeolog
Primary source
Xenbase:XB-GENE-5839274
Locus tag
XELAEV_18032199mg
See related
EnsemblRapid:ENSXLAG00005031998
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
fsbp; rdh54; rad54b
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: 6L
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (137887784..137927488, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (128694381..128734091, complement)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene cadherin 17 L homeolog Neighboring gene GTP binding protein overexpressed in skeletal muscle L homeolog Neighboring gene fibrinogen silencer-binding protein-like Neighboring gene vir like m6A methyltransferase associated L homeolog Neighboring gene CBY1 interacting BAR domain containing 1 L homeolog Neighboring gene epithelial splicing regulatory protein 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC81308

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
  
enables helicase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
RAD54 homolog B L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091651.1 → NP_001085120.1  RAD54 homolog B L homeolog

    See identical proteins and their annotated locations for NP_001085120.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072215
    UniProtKB/TrEMBL
    A0A974HGT5, Q6INQ9
    Related
    ENSXLAP00005095960.1, ENSXLAT00005097727.1
    Conserved Domains (3) summary
    cd00046
    Location:304 → 445
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam00176
    Location:282 → 581
    SNF2_N; SNF2 family N-terminal domain
    pfam00271
    Location:636 → 738
    Helicase_C; Helicase conserved C-terminal domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    137887784..137927488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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