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pdia2.L protein disulfide isomerase family A member 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 399040, updated on 3-Jul-2024

Summary

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Official Symbol
pdia2.L
Official Full Name
protein disulfide isomerase family A member 2 L homeolog
Primary source
Xenbase:XB-GENE-5770864
Locus tag
XELAEV_18045582mg
See related
EnsemblRapid:ENSXLAG00005035093
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
pdi; pdip; XPDIp; pdia2
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Genomic context

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See pdia2.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (122960234..122977432, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (112331248..112348515, complement)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene myosin phosphatase Rho interacting protein L homeolog Neighboring gene axin 1 L homeolog Neighboring gene Rho GDP dissociation inhibitor (GDI) gamma L homeolog Neighboring gene regulator of G-protein signaling 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pancreatic protein disulfide isomerase (XPDIp) is an early marker for the exocrine lineage of the developing pancreas in Xenopus laevis embryos. Afelik S, et al. Gene Expr Patterns, 2004 Jan. PMID 14678831
  2. Screening for novel pancreatic genes from in vitro-induced pancreas in Xenopus. Sogame A, et al. Dev Growth Differ, 2003 Apr. PMID 12752502
  3. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein disulfide isomerase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
protein disulfide isomerase family A member 2 L homeolog
Names
pancreas-specific protein disulfide isomerase
protein disulfide isomerase A2
protein disulfide isomerase family A, member 2
NP_001083648.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001090179.1 → NP_001083648.1  protein disulfide isomerase family A member 2 L homeolog precursor

    See identical proteins and their annotated locations for NP_001083648.1

    Status: PROVISIONAL

    Source sequence(s)
    AY351916
    UniProtKB/TrEMBL
    A0A974C0S6, Q6V4H6
    Related
    ENSXLAP00005104886.1, ENSXLAT00005106927.1
    Conserved Domains (5) summary
    cd02961
    Location:49 → 151
    PDI_a_family; Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family include PDI ...
    cd02981
    Location:159 → 257
    PDI_b_family; Protein Disulfide Isomerase (PDIb) family, redox inactive TRX-like domain b; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family ...
    cd02982
    Location:280 → 370
    PDI_b'_family; Protein Disulfide Isomerase (PDIb') family, redox inactive TRX-like domain b'; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family ...
    cd02995
    Location:391 → 493
    PDI_a_PDI_a'_C; PDIa family, C-terminal TRX domain (a') subfamily; composed of the C-terminal redox active a' domains of PDI, ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are endoplasmic reticulum (ER)-resident eukaryotic proteins involved in oxidative protein ...
    TIGR01130
    Location:46 → 502
    ER_PDI_fam; protein disulfide isomerase, eukaryotic

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    122960234..122977432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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