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SPP2 secreted phosphoprotein 2 [ Gallus gallus (chicken) ]

Gene ID: 396080, updated on 17-Aug-2024

Summary

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Official Symbol
SPP2provided by CGNC
Official Full Name
secreted phosphoprotein 2provided by CGNC
Primary source
CGNC:3030
See related
Ensembl:ENSGALG00010012708
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
GHRG-1
Orthologs
human mouse all
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Genomic context

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See SPP2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (5675139..5682908)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (5615735..5623525)

Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 Neighboring gene transient receptor potential cation channel subfamily M member 8 Neighboring gene uncharacterized LOC121111293 Neighboring gene uncharacterized LOC121111294

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparison of gene expression in normal and growth hormone receptor-deficient dwarf chickens reveals a novel growth hormone regulated gene. Agarwal SK, et al. Biochem Biophys Res Commun, 1995 Jan 5. PMID 7818515
  2. Characterization of the human secreted phosphoprotein 24 gene (SPP2) and comparison of the protein sequence in nine species. Bennett CS, et al. Matrix Biol, 2004 Feb. PMID 15062857
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in bone remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secreted phosphoprotein 24
Names
growth hormone regulated gene-1
secreted phosphoprotein 2, 24kDa
spp-24

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001389344.2 → NP_001376273.2  secreted phosphoprotein 24 isoform 1 precursor

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000235
    UniProtKB/Swiss-Prot
    Q710A0
    UniProtKB/TrEMBL
    A0A8V0YA89
    Related
    ENSGALP00010017644.1, ENSGALT00010030423.1
    Conserved Domains (1) summary
    cl29764
    Location:75 → 135
    Cathelicidins

  2. NM_001389345.2 → NP_001376274.2  secreted phosphoprotein 24 isoform 1 precursor

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000235
    UniProtKB/Swiss-Prot
    Q710A0
    UniProtKB/TrEMBL
    A0A8V0YA89
    Conserved Domains (1) summary
    cl29764
    Location:75 → 135
    Cathelicidins

  3. NM_205168.5 → NP_990499.5  secreted phosphoprotein 24 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000235
    UniProtKB/TrEMBL
    A0A8V0YA92, Q91982
    Related
    ENSGALP00010017649.1, ENSGALT00010030430.1
    Conserved Domains (1) summary
    cl29764
    Location:3 → 63
    Cathelicidins

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5675139..5682908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5615735..5623525
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q710A0.1 GenPept UniProtKB/Swiss-Prot:Q710A0

Gene LinkOut

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Molecular Biology Databases
Research Materials