U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

mss1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541951, updated on 11-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
mss1
Primary source
PomBase:SPAC222.05c
Locus tag
SPOM_SPAC222.05C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (950912..952967, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ragulator complex subunit Lam3 Neighboring gene ncRNA Neighboring gene Ino80 complex subunit Ies6 Neighboring gene nuclear HMG-like acidic protein Mak16 Neighboring gene ncRNA Neighboring gene eIF2 alpha kinase Hri2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables GTP binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables GTPase activity ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in mitochondrial tRNA wobble uridine modification ISO
Inferred from Sequence Orthology
more info
  
involved_in mitochondrial translation NAS
Non-traceable Author Statement
more info
  
involved_in tRNA methylation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in tRNA wobble uridine modification IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in mitochondrial inner membrane ISO
Inferred from Sequence Orthology
more info
  
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
GTPase mss1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    950912..952967 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018541.3 → NP_593144.1  GTPase mss1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593144.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UTE7
    Conserved Domains (3) summary
    cd04164
    Location:237 → 416
    trmE; trmE is a tRNA modification GTPase
    COG0486
    Location:25 → 496
    MnmE; tRNA U34 5-carboxymethylaminomethyl modifying GTPase MnmE/TrmE [Translation, ribosomal structure and biogenesis]
    pfam10396
    Location:25 → 142
    TrmE_N; GTP-binding protein TrmE N-terminus
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials