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LOC18784827 superoxide dismutase [Mn], mitochondrial [ Prunus persica (peach) ]

Gene ID: 18784827, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18784827
Gene description
superoxide dismutase [Mn], mitochondrial
Locus tag
PRUPE_2G262400
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Also known as
sod2; Mn-SOD; MSD1A-a; MSD1A-b; MSD1A-c; MSD1A-d; MSD1B-a; MSD1B-b; MSD1B-c; MSD1B-d; MSD1B-e; MSD1C-a
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Genomic context

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See LOC18784827 in Genome Data Viewer
Location:
chromosome: G2
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G2 NC_034010.1 (27102262..27105118)

Chromosome G2 - NC_034010.1Genomic Context describing neighboring genes Neighboring gene reticulon-like protein B16 Neighboring gene uncharacterized membrane protein At1g06890 Neighboring gene 40S ribosomal protein S26-3 Neighboring gene tRNA (guanine(26)-N(2))-dimethyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034010.1 Chromosome G2 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular cloning, characterisation and expression of a manganese superoxide dismutase gene from peach (Prunus persica [L.] Batsch). Bagnoli F, et al. Mol Genet Genomics, 2002 May. PMID 12073034

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables superoxide dismutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in superoxide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
superoxide dismutase [Mn], mitochondrial
Names
chloroplast Mn-superoxide dismutase 1A-a
chloroplast Mn-superoxide dismutase 1A-b
chloroplast Mn-superoxide dismutase 1A-c
chloroplast Mn-superoxide dismutase 1A-d
chloroplast Mn-superoxide dismutase 1B-a
chloroplast Mn-superoxide dismutase 1B-b
chloroplast Mn-superoxide dismutase 1B-c
chloroplast Mn-superoxide dismutase 1B-d
chloroplast Mn-superoxide dismutase 1B-e
chloroplast Mn-superoxide dismutase 1C-a
manganese superoxide dismutase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034010.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    27102262..27105118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007218235.2 → XP_007218297.1  superoxide dismutase [Mn], mitochondrial

    See identical proteins and their annotated locations for XP_007218297.1

    UniProtKB/TrEMBL
    H6WZZ8, H9XW16, H9XW19
    Conserved Domains (3) summary
    PLN02471
    Location:1 → 237
    PLN02471; superoxide dismutase [Mn]
    pfam00081
    Location:36 → 117
    Sod_Fe_N; Iron/manganese superoxide dismutases, alpha-hairpin domain
    pfam02777
    Location:127 → 230
    Sod_Fe_C; Iron/manganese superoxide dismutases, C-terminal domain
Nucleotide Protein Strain
Heading Accession and Version

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