3TQJ,1UES,3MDS,1D5N,1B06,1MA1,3DC6,2P4K


Conserved Protein Domain Family
Sod_Fe_N

?
pfam00081: Sod_Fe_N (this model, PSSM-Id:278509 is obsolete and has been replaced by 425457)
Click on image for an interactive view with Cn3D
Iron/manganese superoxide dismutases, alpha-hairpin domain
superoxide dismutases (SODs) catalyze the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplasmic Cu/Zn SOD, and a mitochondrial Mn/Fe SOD. N-terminal domain is a long alpha antiparallel hairpin. A small fragment of YTRE_LEPBI matches well - sequencing error?
Statistics
?
PSSM-Id: 278509
Aligned: 24 rows
Threshold Bit Score: 116.239
Created: 11-Jul-2016
Updated: 4-Aug-2016
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3TQJ_A         2 AFELPDLPYKLNALEPHISQETLEYHHGKHHRAYVNKLNKLIEGTPFEKEPLEEII-R----KSDGGIFNNAAQHWNHTF 76  Coxiella burnetii
Q4K776         2 AFELPPLPYAHDALQPHISKETLEYHHDKHHNTYVVNLNNLVPGTEFEGKTLEEIV-K----TSSGGIFNNAAQVWNHTF 76  Pseudomonas pro...
Q32FB5         2 SFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEII-R----SSEGGVFNNAAQVWNHTF 76  Shigella dysent...
1UES_D         2 THELISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLIIGTEFENADLNTIV-Q----KSEGGIFNNAGQTLNHNL 76  Porphyromonas g...
P37369         2 AHTLPPLPYALDALAPRISKETLEFHYGKHHQTYVTNLNNLIPGTEFENLSLEEIV-K----KSSGGVFNNAAQVWNHTF 76  Bordetella pert...
P31108         2 TFTLPQLPYALDALAPHVSKETLEYHYGKHHNTYVTNLNKLIPGTEFESMTLEEIImK----AK-GGIFNNAAQVWNHTF 76  Legionella pneu...
Q7YK44        48 KFDLIPPPYPMDALEPHMSSRTFEFHWGKHHRAYVDNLNKQIDGTELDGKTLEDIIlVtynnGAPLPAFNNAAQAWNHQF 127 tomato
P34107         2 SFQLPQLPYAYNALEPHISKETLEFHHDKHHATYVNKLNGLVKGTEQEHKTLEELIkQ----KPTQAIYNNAAQAWNHAF 77  Entamoeba histo...
2P4K_C         1 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAANVNNLNVTEEKYQEALAKGDVTAqI----ALQPALKFNgGGHINHSI 76  human
XP_002319332  25 TFSLPDLPYDYGALEPAISGEIMQLHHQKHHQTYITNYNKSLEQLHHAMEKGDSSAvV----KLQSAIKFNGGGHVNHSI 100 black cottonwood
3TQJ_A        77 YWHCMS 82  Coxiella burnetii
Q4K776        77 YWNCLA 82  Pseudomonas protegens Pf-5
Q32FB5        77 YWNCLA 82  Shigella dysenteriae Sd197
1UES_D        77 YFTQFR 82  Porphyromonas gingivalis
P37369        77 YWNSLS 82  Bordetella pertussis Tohama I
P31108        77 YWHSMS 82  Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Q7YK44       128 FWESMK 133 tomato
P34107        78 YWKCMC 83  Entamoeba histolytica
2P4K_C        77 FWTNLS 82  human
XP_002319332 101 FWKNLt 106 black cottonwood
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap