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MPH1 3'-5' DNA helicase [ Yamadazyma tenuis ]

Gene ID: 18249980, updated on 10-Jul-2024

Summary

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Gene symbol
MPH1
Gene description
3'-5' DNA helicase
Locus tag
PSN45_002237
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Yamadazyma tenuis (strain: ATCC 10573, type-material: type material of Candida tenuis)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Yamadazyma
Old locus tag
CANTEDRAFT_136532
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Genomic context

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See MPH1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_089462.1 (1903898..1907014)

Chromosome 2 - NC_089462.1Genomic Context describing neighboring genes Neighboring gene NAD(P)-dependent dehydrogenase Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene translation machinery-associated protein 20

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089462.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of xylose-fermenting fungi for enhanced biofuel production. Wohlbach DJ, et al. Proc Natl Acad Sci U S A, 2011 Aug 9. PMID 21788494, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via synthesis-dependent strand annealing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3'-5' DNA helicase
XP_006689243.1
  • BUSCO:EOG092614O9; COG:L; EggNog:ENOG503NUYD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_089462.1 Reference assembly

    Range
    1903898..1907014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006689180.2 → XP_006689243.1  3'-5' DNA helicase [Yamadazyma tenuis]

    See identical proteins and their annotated locations for XP_006689243.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G3BFD2
    Conserved Domains (4) summary
    COG1111
    Location:125 → 690
    MPH1; ERCC4-related helicase [Replication, recombination and repair]
    cd00046
    Location:147 → 288
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    cd12091
    Location:340 → 454
    FANCM_ID; Insert domain of FANCM and related proteins
    pfam00271
    Location:468 → 611
    Helicase_C; Helicase conserved C-terminal domain
Nucleotide Protein
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