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Lnpep leucyl and cystinyl aminopeptidase [ Rattus norvegicus (Norway rat) ]

Gene ID: 171105, updated on 28-Oct-2024

Summary

Symbol
Lnpepprovided by RGD
Full Name
leucyl and cystinyl aminopeptidaseprovided by RGD
Primary source
RGD:621752
See related
EnsemblRapid:ENSRNOG00000055229 AllianceGenome:RGD:621752
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
IRAP; GP160; OTase; P-LAP; Vp165
Summary
Enables aminopeptidase activity. Involved in several processes, including neuropeptide catabolic process; positive regulation of blood pressure; and regulation of long-term neuronal synaptic plasticity. Located in several cellular components, including insulin-responsive compartment; neuronal cell body; and perinuclear region of cytoplasm. Used to study type 2 diabetes mellitus. Orthologous to human LNPEP (leucyl and cystinyl aminopeptidase). [provided by Alliance of Genome Resources, Oct 2024]
Expression
Biased expression in Adrenal (RPKM 499.4), Heart (RPKM 490.1) and 9 other tissues See more
Orthologs
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Genomic context

See Lnpep in Genome Data Viewer
Location:
1q12
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (66931712..67027610, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (58258642..58355532, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (59289392..59384540, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene limb and CNS expressed 1 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing protein 2-like 2, pseudogene 6 Neighboring gene zinc finger protein 431 like, pseudogene 7 Neighboring gene protein phosphatase 2 catalytic subunit beta, pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables aminopeptidase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables aminopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables aminopeptidase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables aminopeptidase activity ISO
Inferred from Sequence Orthology
more info
 
enables metalloaminopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables peptide binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables zinc ion binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in negative regulation of cold-induced thermogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of cold-induced thermogenesis ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in neuropeptide catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in peptide catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in peptide catabolic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in peptide catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of blood pressure IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within protein catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in proteolysis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of blood pressure IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of long-term neuronal synaptic plasticity IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to hormone IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in cell surface IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasmic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasmic vesicle membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in insulin-responsive compartment IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane ISO
Inferred from Sequence Orthology
more info
 
located_in neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 
located_in perinuclear region of cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in perinuclear region of cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in vesicle IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
leucyl-cystinyl aminopeptidase
Names
aminopeptidase Vp165
angiotensin IV receptor
cystinyl aminopeptidase
insulin-regulated membrane aminopeptidase IRAP
insulin-responsive aminopeptidase
leucyl-cystinyl aminopeptidase-like
leucyl/cystinyl aminopeptidase
oxytocinase
placental leucine aminopeptidase
vesicle protein of 165 kDa
NP_001106874.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001113403.3NP_001106874.1  leucyl-cystinyl aminopeptidase

    See identical proteins and their annotated locations for NP_001106874.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/Swiss-Prot
    P97629, Q11009
    UniProtKB/TrEMBL
    A0A0G2JUW8, A6KB65
    Related
    ENSRNOP00000017718.7, ENSRNOT00000017718.8
    Conserved Domains (3) summary
    cd09601
    Location:176617
    M1_APN_2; Peptidase M1 Aminopeptidase N family incudes tricorn interacting factor F3, Endoplasmic reticulum aminopeptidase 1 (ERAP1), Aminopeptidase Q (APQ)
    pfam01433
    Location:167552
    Peptidase_M1; Peptidase family M1
    pfam11838
    Location:6901005
    ERAP1_C; ERAP1-like C-terminal domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    66931712..67027610 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_133574.1: Suppressed sequence

    Description
    NM_133574.1: This RefSeq was removed because currently there is insufficient support for this transcript.