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LMXM_33_2260 ATP-dependent RNA helicase-like protein [ Leishmania mexicana MHOM/GT/2001/U1103 ]

Gene ID: 13452386, updated on 28-Dec-2023

Summary

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Gene symbol
LMXM_33_2260
Gene description
ATP-dependent RNA helicase-like protein
Locus tag
LMXM_33_2260
Gene type
protein coding
RNA name
ATP-dependent RNA helicase-like protein
RefSeq status
PROVISIONAL
Organism
Leishmania mexicana MHOM/GT/2001/U1103 (strain: MHOM/GT/2001/U1103)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 33
Exon count:
1
Sequence:
Chromosome: 33; NC_018337.1 (826923..829352, complement)

Chromosome 33 - NC_018337.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018337.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ATP-dependent RNA helicase-like protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018337.1 Reference assembly

    Range
    826923..829352 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003878730.1 → XP_003878779.1  ATP-dependent RNA helicase-like protein [Leishmania mexicana MHOM/GT/2001/U1103]

    See identical proteins and their annotated locations for XP_003878779.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E9B512
    Conserved Domains (5) summary
    smart00490
    Location:377 → 461
    HELICc; helicase superfamily c-terminal domain
    smart00487
    Location:108 → 284
    DEXDc; DEAD-like helicases superfamily
    smart00847
    Location:532 → 612
    HA2; Helicase associated domain (HA2) Add an annotation
    cd00046
    Location:120 → 257
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam07717
    Location:648 → 774
    OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
Nucleotide Protein
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