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LOC121856152 laminin subunit alpha-2-like [ Homarus americanus (American lobster) ]

Gene ID: 121856152, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121856152
Gene description
laminin subunit alpha-2-like
See related
EnsemblRapid:LOC121856152
Gene type
protein coding
RefSeq status
MODEL
Organism
Homarus americanus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Nephropoidea; Nephropidae; Homarus
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Genomic context

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See LOC121856152 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
39
Annotation release Status Assembly Chr Location
100 current GMGI_Hamer_2.0 (GCF_018991925.1) Unplaced Scaffold NW_024755055.1 (880813..924827, complement)

NW_024755055.1Genomic Context describing neighboring genes Neighboring gene von Willebrand factor A domain-containing protein DDB_G0286969-like Neighboring gene delta4-sphingolipid-FADS-like protein ifc Neighboring gene laminin subunit alpha-1-like Neighboring gene protein piccolo-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024755055 Unplaced Scaffold Reference GMGI_Hamer_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Prediction of a neuropeptidome for the eyestalk ganglia of the lobster Homarus americanus using a tissue-specific de novo assembled transcriptome. Christie AE, et al. Gen Comp Endocrinol, 2017 Mar 1. PMID 27823957, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homarus americanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GMGI_Hamer_2.0 Primary Assembly

Genomic

  1. NW_024755055.1 Reference GMGI_Hamer_2.0 Primary Assembly

    Range
    880813..924827 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042351466.1 → XP_042207400.1  laminin subunit alpha-2-like

    UniProtKB/TrEMBL
    A0A8J5JCV3
    Related
    XP_042207400.1, XM_042351466.1
    Conserved Domains (7) summary
    smart00282
    Location:1030 → 1169
    LamG; Laminin G domain
    COG1196
    Location:675 → 1003
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00055
    Location:389 → 434
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:1808 → 1963
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam06008
    Location:457 → 700
    Laminin_I; Laminin Domain I
    pfam06009
    Location:895 → 1019
    Laminin_II; Laminin Domain II
    cl02548
    Location:105 → 229
    Laminin_B; Laminin B (Domain IV)
Nucleotide Protein
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