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LAMA1 laminin subunit alpha 1 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121495728, updated on 22-Mar-2024

Summary

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Gene symbol
LAMA1
Gene description
laminin subunit alpha 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
63
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 1 NC_054824.1 (112521348..112676698)

Chromosome 1 - NC_054824.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121472679 Neighboring gene elongation factor 1-gamma-like Neighboring gene leucine rich repeat containing 30 Neighboring gene Rho GTPase activating protein 28 Neighboring gene small nucleolar RNA U3 Neighboring gene importin subunit alpha-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054824.1 Chromosome 1 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in blood vessel morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in camera-type eye development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054824.1 Reference ASM1834538v1 Primary Assembly

    Range
    112521348..112676698
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041763608.1 → XP_041619542.1  laminin subunit alpha-1

    Conserved Domains (8) summary
    smart00136
    Location:25 → 277
    LamNT; Laminin N-terminal domain (domain VI)
    smart00180
    Location:960 → 1004
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00281
    Location:574 → 704
    LamB; Laminin B domain
    cd00055
    Location:910 → 957
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2747 → 2882
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    TIGR02168
    Location:1731 → 2063
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam06008
    Location:1589 → 1833
    Laminin_I; Laminin Domain I
    pfam06009
    Location:2022 → 2155
    Laminin_II; Laminin Domain II
Nucleotide Protein Strain
Heading Accession and Version

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