U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

lama2 laminin, alpha 2 [ Colossoma macropomum (tambaqui) ]

Gene ID: 118816290, updated on 20-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
lama2
Gene description
laminin, alpha 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Colossoma macropomum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Colossoma
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See lama2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
65
Annotation release Status Assembly Chr Location
100 current Colossoma_macropomum (GCF_904425465.1) Unplaced Scaffold NW_023494795.1 (42185348..42438998, complement)

NW_023494795.1Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 18 Neighboring gene enoyl-[acyl-carrier-protein] reductase, mitochondrial Neighboring gene vesicular inhibitory amino acid transporter Neighboring gene protein tyrosine phosphatase receptor type K Neighboring gene uncharacterized LOC118815995

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_023494795 Unplaced Scaffold Reference Colossoma_macropomum

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
laminin subunit alpha-2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Colossoma macropomum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Colossoma_macropomum

Genomic

  1. NW_023494795.1 Reference Colossoma_macropomum

    Range
    42185348..42438998 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036582814.1 → XP_036438707.1  laminin subunit alpha-2

    Conserved Domains (10) summary
    smart00180
    Location:934 → 978
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2129 → 2271
    LamG; Laminin G domain
    cd00055
    Location:724 → 773
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2915 → 3067
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam06008
    Location:1558 → 1810
    Laminin_I; Laminin Domain I
    pfam06009
    Location:1997 → 2133
    Laminin_II; Laminin Domain II
    pfam00052
    Location:1200 → 1338
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:1380 → 1426
    Laminin_EGF; Laminin EGF domain
    pfam00054
    Location:2328 → 2463
    Laminin_G_1; Laminin G domain
    pfam00055
    Location:26 → 271
    Laminin_N; Laminin N-terminal (Domain VI)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.