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LOC118430515 cation-dependent mannose-6-phosphate receptor-like [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118430515, updated on 14-Dec-2023

Summary

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Gene symbol
LOC118430515
Gene description
cation-dependent mannose-6-phosphate receptor-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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See LOC118430515 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 14 NC_049992.1 (10048393..10055371, complement)

Chromosome 14 - NC_049992.1Genomic Context describing neighboring genes Neighboring gene exocyst complex component 8-like Neighboring gene kelch-like protein 24 Neighboring gene osmotic avoidance abnormal protein 3-like Neighboring gene mediator of DNA damage checkpoint protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049992.1 Chromosome 14 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein domain specific binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein targeting to lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cation-dependent mannose-6-phosphate receptor-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049992.1 Reference Bfl_VNyyK Primary Assembly

    Range
    10048393..10055371 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035841428.1 → XP_035697321.1  cation-dependent mannose-6-phosphate receptor-like

    UniProtKB/TrEMBL
    A0A9J7NC49
    Conserved Domains (1) summary
    cl39051
    Location:32 → 250
    ATG27; Autophagy-related protein 27
Nucleotide Protein Strain
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