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pigb phosphatidylinositol glycan anchor biosynthesis, class B [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118393886, updated on 20-Mar-2024

Summary

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Gene symbol
pigb
Gene description
phosphatidylinositol glycan anchor biosynthesis, class B
See related
EnsemblRapid:ENSOKEG00005043481
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See pigb in Genome Data Viewer
Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 14 NC_068434.1 (69994865..69998294, complement)

Chromosome 14 - NC_068434.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118393888 Neighboring gene pygopus homolog 1-like Neighboring gene cell cycle progression protein 1-like Neighboring gene ras-related protein Rab-27A-like Neighboring gene probable ribosome biogenesis protein RLP24

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068434.1 Chromosome 14 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068434.1 Reference Oket_V2 Primary Assembly

    Range
    69994865..69998294 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035787052.2 → XP_035642945.1  GPI mannosyltransferase 3 isoform X1

    Conserved Domains (1) summary
    cl21590
    Location:42 → 521
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_035787055.2 → XP_035642948.1  GPI mannosyltransferase 3 isoform X3

    Conserved Domains (1) summary
    cl21590
    Location:2 → 446
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_035787054.2 → XP_035642947.1  GPI mannosyltransferase 3 isoform X2

    Related
    ENSOKEP00005076623.1, ENSOKET00005091988.1
    Conserved Domains (1) summary
    cl21590
    Location:31 → 510
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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