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dnajb6b DnaJ heat shock protein family (Hsp40) member B6b [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118374148, updated on 20-Mar-2024

Summary

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Gene symbol
dnajb6b
Gene description
DnaJ heat shock protein family (Hsp40) member B6b
See related
EnsemblRapid:ENSOKEG00005002515
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See dnajb6b in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 4 NC_068424.1 (33711411..33753708)

Chromosome 4 - NC_068424.1Genomic Context describing neighboring genes Neighboring gene motor neuron and pancreas homeobox 1 Neighboring gene ubiquitin protein ligase E3C Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene uncharacterized LOC118374296 Neighboring gene non-SMC condensin II complex, subunit G2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068424.1 Chromosome 4 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068424.1 Reference Oket_V2 Primary Assembly

    Range
    33711411..33753708
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035760540.2 → XP_035616433.1  dnaJ homolog subfamily B member 6b isoform X2

    Conserved Domains (1) summary
    COG0484
    Location:2 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  2. XM_035760554.2 → XP_035616447.1  dnaJ homolog subfamily B member 6b isoform X4

    Conserved Domains (1) summary
    COG0484
    Location:2 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  3. XM_035760523.2 → XP_035616416.1  dnaJ homolog subfamily B member 6b isoform X1

    Conserved Domains (1) summary
    COG0484
    Location:2 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  4. XM_035760547.2 → XP_035616440.1  dnaJ homolog subfamily B member 6b isoform X3

    Related
    ENSOKEP00005004523.1, ENSOKET00005005065.1
    Conserved Domains (1) summary
    COG0484
    Location:2 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  5. XM_035760562.2 → XP_035616455.1  dnaJ homolog subfamily B member 6b isoform X6

    Related
    ENSOKEP00005004514.1, ENSOKET00005005056.1
    Conserved Domains (1) summary
    PRK10767
    Location:4 → 130
    PRK10767; chaperone protein DnaJ; Provisional

  6. XM_052506438.1 → XP_052362398.1  dnaJ homolog subfamily B member 6b isoform X5

    Related
    ENSOKEP00005004505.1, ENSOKET00005005047.1

  7. XM_035760529.2 → XP_035616422.1  dnaJ homolog subfamily B member 6b isoform X1

    Conserved Domains (1) summary
    COG0484
    Location:2 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  8. XM_035760533.2 → XP_035616426.1  dnaJ homolog subfamily B member 6b isoform X1

    Conserved Domains (1) summary
    COG0484
    Location:2 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein Strain
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