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Conserved domains on  [gi|1888996968|ref|XP_035616416|]
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dnaJ homolog subfamily B member 6b isoform X1 [Oncorhynchus keta]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 4-130 2.39e-41

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 147.21  E-value: 2.39e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYGkeglagnggrgghy 83
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYG-------------- 70

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1888996968  84 HNG-DH------FSGGFTFRNP-EDVFREFFGGRdpfadffadddffGGGHRQRV 130
Cdd:PRK10767   71 HAAfEQggggggFGGGGGFGDIfGDIFGDIFGGG-------------RGGGRQRA 112
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-130 2.39e-41

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 147.21  E-value: 2.39e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYGkeglagnggrgghy 83
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYG-------------- 70

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1888996968  84 HNG-DH------FSGGFTFRNP-EDVFREFFGGRdpfadffadddffGGGHRQRV 130
Cdd:PRK10767   71 HAAfEQggggggFGGGGGFGDIfGDIFGDIFGGG-------------RGGGRQRA 112
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-108 3.66e-38

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 138.50  E-value: 3.66e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGRGGHY 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGG 79

                          90       100
                  ....*....|....*....|....*..
gi 1888996968  84 HNGDHFS--GGFtfrnpEDVFREFFGG 108
Cdd:TIGR02349  80 FNGFDIGffGDF-----GDIFGDFFGG 101
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 4.54e-34

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 119.11  E-value: 4.54e-34
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPE-AEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-69 6.56e-33

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 118.65  E-value: 6.56e-33
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1888996968   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYG 69
Cdd:COG0484     2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPE-AEEKFKEINEAYEVLSDPEKRAAYDRFG 66
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 2.79e-30

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 108.86  E-value: 2.79e-30
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968    2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEDAERKFKELSEAYEVLSDANK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-108 5.97e-29

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 115.30  E-value: 5.97e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNpdNKEDAERKFKELSEAYEVLSDANKKNQYDRYGkeglagnggrggh 82
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYG------------- 70

                          90       100
                  ....*....|....*....|....*.
gi 1888996968  83 yHNGDHFSGGFTFrNPEDVFREFFGG 108
Cdd:NF037946   71 -HDGVDGEGGFGF-DAFDVFSSFFET 94
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 1.34e-27

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 101.85  E-value: 1.34e-27
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPE-AEEKFKEINEAYEVLSD 55
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-130 2.39e-41

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 147.21  E-value: 2.39e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYGkeglagnggrgghy 83
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYG-------------- 70

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1888996968  84 HNG-DH------FSGGFTFRNP-EDVFREFFGGRdpfadffadddffGGGHRQRV 130
Cdd:PRK10767   71 HAAfEQggggggFGGGGGFGDIfGDIFGDIFGGG-------------RGGGRQRA 112
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-108 3.66e-38

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 138.50  E-value: 3.66e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGRGGHY 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGG 79

                          90       100
                  ....*....|....*....|....*..
gi 1888996968  84 HNGDHFS--GGFtfrnpEDVFREFFGG 108
Cdd:TIGR02349  80 FNGFDIGffGDF-----GDIFGDFFGG 101
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 4.54e-34

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 119.11  E-value: 4.54e-34
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPE-AEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-69 6.56e-33

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 118.65  E-value: 6.56e-33
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1888996968   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYG 69
Cdd:COG0484     2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPE-AEEKFKEINEAYEVLSDPEKRAAYDRFG 66
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-108 1.16e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 124.19  E-value: 1.16e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGRGGH 82
Cdd:PRK14298    6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAEDI 83

                          90       100
                  ....*....|....*....|....*.
gi 1888996968  83 YHNGDHfsGGFtfrnpEDVFREFFGG 108
Cdd:PRK14298   84 FRGADF--GGF-----GDIFEMFFGG 102
PRK14280 PRK14280
molecular chaperone DnaJ;
3-108 4.14e-32

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 122.91  E-value: 4.14e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNpdNKEDAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGRGGh 82
Cdd:PRK14280    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDIN--KEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGG- 81

                          90       100
                  ....*....|....*....|....*.
gi 1888996968  83 yHNGDHFSGGFTFrnpEDVFREFFGG 108
Cdd:PRK14280   82 -FGGGDFGGGFGF---EDIFSSFFGG 103
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 4-107 9.73e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 118.71  E-value: 9.73e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYGKEGLagnggrgghy 83
Cdd:PRK14294    6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKE-AEELFKEAAEAYEVLSDPKKRGIYDQYGHEGL---------- 74

                          90       100
                  ....*....|....*....|....*...
gi 1888996968  84 hNGDHFSG--GF--TFRNPEDVFREFFG 107
Cdd:PRK14294   75 -SGTGFSGfsGFddIFSSFGDIFEDFFG 101
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 2-107 1.49e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 118.79  E-value: 1.49e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGnggrgg 81
Cdd:PRK14284    1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAE-AEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFA------ 73

                          90       100
                  ....*....|....*....|....*.
gi 1888996968  82 hyhnGDHFSGGFTFRNPEDVFREFFG 107
Cdd:PRK14284   74 ----GAGGFGGAGMGNMEDALRTFMG 95
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-109 1.64e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 118.75  E-value: 1.64e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGRGGH 82
Cdd:PRK14277    6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKE-AEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGG 84

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1888996968  83 YHNGDHFSGGFTFRNP------EDVFREFFGGR 109
Cdd:PRK14277   85 FGQGGFGGGGFDFDFGgfgdifEDIFGDFFGTG 117
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-107 2.66e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 117.92  E-value: 2.66e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYGkeglagnggrggh 82
Cdd:PRK14301    5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPE-AEQKFKEAAEAYEVLRDAEKRARYDRFG------------- 70

                          90       100
                  ....*....|....*....|....*....
gi 1888996968  83 yHNGDHFSGGFT-FRNPEDVFREF---FG 107
Cdd:PRK14301   71 -HAGVNGNGGFGgFSSAEDIFSHFsdiFG 98
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 2.79e-30

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 108.86  E-value: 2.79e-30
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968    2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEDAERKFKELSEAYEVLSDANK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-108 5.66e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 116.95  E-value: 5.66e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEDAERKFKELSEAYEVLSDANKKNQYDRYGKeGLAGNGGRGGH 82
Cdd:PRK14290    4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGT-VDFGAGGSNFN 82

                          90       100
                  ....*....|....*....|....*.
gi 1888996968  83 YHNGDHFSggftfrNPEDVFREFFGG 108
Cdd:PRK14290   83 WDNFTHFS------DINDIFNQIFGG 102
PRK14297 PRK14297
molecular chaperone DnaJ;
3-108 1.48e-29

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 116.04  E-value: 1.48e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGRGGH 82
Cdd:PRK14297    5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKE-AEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGSG 83

                          90       100
                  ....*....|....*....|....*...
gi 1888996968  83 YHNGDHFS--GGFtfrnpEDVFREFFGG 108
Cdd:PRK14297   84 GFGGFDFSdmGGF-----GDIFDSFFGG 106
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-129 3.45e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 115.29  E-value: 3.45e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGRGGh 82
Cdd:PRK14281    4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKE-AEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGG- 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1888996968  83 yhNGDHFSGGFTFRNPEDVFREFFGG---RDPFADFFADDDFFGGGHRQR 129
Cdd:PRK14281   82 --GPGYGGGGGDFNDIFSAFNDMFGGgarRGGGSPFGFEDVFGGGGRRRR 129
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-108 5.97e-29

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 115.30  E-value: 5.97e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNpdNKEDAERKFKELSEAYEVLSDANKKNQYDRYGkeglagnggrggh 82
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYG------------- 70

                          90       100
                  ....*....|....*....|....*.
gi 1888996968  83 yHNGDHFSGGFTFrNPEDVFREFFGG 108
Cdd:NF037946   71 -HDGVDGEGGFGF-DAFDVFSSFFET 94
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-105 1.48e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 112.96  E-value: 1.48e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEDAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGRGGh 82
Cdd:PRK14282    5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQETE- 83

                          90       100
                  ....*....|....*....|...
gi 1888996968  83 yhngdhfSGGFTFrnpEDVFREF 105
Cdd:PRK14282   84 -------SGGGFF---EDIFKDF 96
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 2-108 3.91e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 112.10  E-value: 3.91e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGRGG 81
Cdd:PRK14276    4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA 81

                          90       100
                  ....*....|....*....|....*..
gi 1888996968  82 HYHNGdhFSGGFTFRNPEDVFREFFGG 108
Cdd:PRK14276   82 GGFGG--FDGSGGFGGFEDIFSSFFGG 106
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 1.34e-27

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 101.85  E-value: 1.34e-27
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPE-AEEKFKEINEAYEVLSD 55
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-108 2.20e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 109.86  E-value: 2.20e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGRggh 82
Cdd:PRK14291    4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQ--- 78

                          90       100
                  ....*....|....*....|....*.
gi 1888996968  83 YHNGDHFSgGFTFRNPEDVFREFFGG 108
Cdd:PRK14291   79 QQGQEGFS-DFGGGNIEDILEDVFDI 103
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-64 2.90e-27

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 101.23  E-value: 2.90e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKeDAERKFKELSEAYEVLSDANKKNQ 64
Cdd:COG5407     1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDP-KAEERFKEINEAYELLSDAEKRAR 61
PRK14289 PRK14289
molecular chaperone DnaJ;
3-108 9.64e-27

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 108.38  E-value: 9.64e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGgrggh 82
Cdd:PRK14289    6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKE-AEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAA----- 79

                          90       100       110
                  ....*....|....*....|....*....|
gi 1888996968  83 yhNGDHFSG-GFTFrnpEDVFREF---FGG 108
Cdd:PRK14289   80 --GGGGFSGeGMSM---EDIFSMFgdiFGG 104
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-108 1.91e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 107.22  E-value: 1.91e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSDANKKNQYDRYGkeglagnggrggh 82
Cdd:PRK14283    6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFG------------- 70

                          90       100
                  ....*....|....*....|....*....
gi 1888996968  83 yHNG-DHFSGGFTFRNP--EDVFREFFGG 108
Cdd:PRK14283   71 -HAGmDGFSQEDIFNNInfEDIFQGFGFG 98
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-108 2.08e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 107.28  E-value: 2.08e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   1 MTEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGgrg 80
Cdd:PRK14292    1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMP--- 75

                          90       100
                  ....*....|....*....|....*...
gi 1888996968  81 ghyhNGDHFsGGFTFrNPEDVFREFFGG 108
Cdd:PRK14292   76 ----GGDPF-GGMGF-DPMDIFEQLFGG 97
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 2-108 4.26e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 106.29  E-value: 4.26e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGrgg 81
Cdd:PRK14278    3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGG--- 77

                          90       100
                  ....*....|....*....|....*..
gi 1888996968  82 hyhnGDHFSGGFTfrNPEDVFREFFGG 108
Cdd:PRK14278   78 ----GGGFGGGFG--GLGDVFEAFFGG 98
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-109 6.22e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 105.84  E-value: 6.22e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGrggh 82
Cdd:PRK14285    4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKE-AESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGG---- 78

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1888996968  83 yHNGdhFSGGFT-----FRNPEDVFREFFGGR 109
Cdd:PRK14285   79 -FEG--FSGGFSgfsdiFEDFGDIFDSFFTGN 107
PRK14293 PRK14293
molecular chaperone DnaJ;
1-108 8.71e-26

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 105.46  E-value: 8.71e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   1 MTEYYQILGVQRNASAEDIKKAYRKLALKWHPDKnpdNKE-DAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGR 79
Cdd:PRK14293    2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDV---NKEpGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGF 78

                          90       100
                  ....*....|....*....|....*....
gi 1888996968  80 GGHyhnGDhfSGGFTfrnpeDVFREFFGG 108
Cdd:PRK14293   79 PDM---GD--MGGFA-----DIFETFFSG 97
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-108 2.02e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 104.30  E-value: 2.02e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGgrgghy 83
Cdd:PRK14286    6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKE-SEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGA------ 78

                          90       100       110
                  ....*....|....*....|....*....|
gi 1888996968  84 hnGDHFSGGFT-----FRNPEDVFREFFGG 108
Cdd:PRK14286   79 --GGFGQGAYTdfsdiFGDFGDIFGDFFGG 106
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-109 2.05e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 100.01  E-value: 2.05e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGRGGh 82
Cdd:PRK14299    5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPP- 81

                          90       100       110
                  ....*....|....*....|....*....|
gi 1888996968  83 yhNGDHFSGGFTFRNPED---VFREFFGGR 109
Cdd:PRK14299   82 --PGPPGGGDFSGFNVGDfsdFFQQLFGGR 109
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-67 3.46e-24

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 94.01  E-value: 3.46e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1888996968   1 MTEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEDAERKFKELSEAYEVLSDANKKNQYDR 67
Cdd:COG2214     4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYDR 70
PRK14279 PRK14279
molecular chaperone DnaJ;
3-66 4.82e-22

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 95.18  E-value: 4.82e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYD 66
Cdd:PRK14279   10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPA-AEERFKAVSEAHDVLSDPAKRKEYD 72
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-108 8.49e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 94.31  E-value: 8.49e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNpdNKEDAERKFKELSEAYEVLSDANKKNQYDRYGkeglagnggrggH 82
Cdd:PRK14287    5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVN--KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFG------------H 70

                          90       100
                  ....*....|....*....|....*...
gi 1888996968  83 YHNGDHFSGGFT--FRNPEDVFREFFGG 108
Cdd:PRK14287   71 TDPNQGFGGGGAgdFGGFSDIFDMFFGG 98
PRK14295 PRK14295
molecular chaperone DnaJ;
3-66 2.52e-21

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 92.99  E-value: 2.52e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYD 66
Cdd:PRK14295   10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAK-AEERFKEISEAYDVLSDEKKRKEYD 72
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 3-108 3.06e-20

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 90.27  E-value: 3.06e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkedaERKFKELSEAYEVLSDANKKNQYDRYGKEGlagnggrggh 82
Cdd:PTZ00037   29 KLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEG---------- 93

                          90       100
                  ....*....|....*....|....*.
gi 1888996968  83 yhngdhFSGGFTFRNPEDVFREFFGG 108
Cdd:PTZ00037   94 ------LEGGEQPADASDLFDLIFGG 113
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-106 1.12e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 85.45  E-value: 1.12e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNpdNKEDAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGRGGh 82
Cdd:PRK14300    4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGG- 80

                          90       100
                  ....*....|....*....|....
gi 1888996968  83 yhNGDHfsGGFtFRNPEDVFREFF 106
Cdd:PRK14300   81 --GGNH--GGF-HPDINDIFGDFF 99
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-107 1.94e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 84.61  E-value: 1.94e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNpdNKEDAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGRGGH 82
Cdd:PRK14296    5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLN--KSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSSN 82

                          90       100
                  ....*....|....*....|....*...
gi 1888996968  83 YHN-GDHFS--GGFTFRNPEDVFREFFG 107
Cdd:PRK14296   83 FGDfEDLFSnmGSSGFSSFTNIFSDFFG 110
PRK10266 PRK10266
curved DNA-binding protein;
3-107 2.19e-18

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 83.72  E-value: 2.19e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1888996968   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNkeDAERKFKELSEAYEVLSDANKKNQYDRYGKEGLAGNGGRGGH 82
Cdd:PRK10266    5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP--DAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQ 82

                          90       100
                  ....*....|....*....|....*
gi 1888996968  83 YHNGDHFSGGftfrNPEDVFREFFG 107
Cdd:PRK10266   83 HGDGQSFNAE----DFDDIFSSIFG 103
PRK14288 PRK14288
molecular chaperone DnaJ;
4-71 1.20e-16

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 79.73  E-value: 1.20e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1888996968   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSDANKKNQYDRYGKE 71
Cdd:PRK14288    5 YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKE-AEEKFKLINEAYGVLSDEKKRALYDRYGKK 71
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-59 1.34e-11

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 59.43  E-value: 1.34e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1888996968   1 MTEYYQILGVQRNASAEDIKKAYRKLALKWHPDK-----NPDNKEDAERKFKELSEAYEVLSDA 59
Cdd:COG1076     3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDP 66
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 2-69 1.44e-10

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 62.11  E-value: 1.44e-10
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1888996968    2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNkeDAERKFKELSEAYEVLSDANKKNQYDRYG 69
Cdd:PTZ00341   573 TLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFG 638
djlA PRK09430
co-chaperone DjlA;
5-56 4.33e-07

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 50.20  E-value: 4.33e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1888996968   5 YQILGVQRNASAEDIKKAYRKLALKWHPDK------NPDNKEDAERKFKELSEAYEVL 56
Cdd:PRK09430  203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELI 260
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 1.76e-05

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 44.48  E-value: 1.76e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1888996968   1 MTEYYQILGVQR--NASAEDIKKAYRKLALKWHPD--KNPDNKEDAERKFKELSEAYEVLSDANKKNQY 65
Cdd:PRK01356    1 MQNYFQLLGLPQeyNIDLKILEKQYFAMQVKYHPDkaKTLQEKEQNLIIASELNNAYSTLKDALKRAEY 69
PHA03102 PHA03102
Small T antigen; Reviewed
 6-58 2.45e-05

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 43.51  E-value: 2.45e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1888996968   6 QILGVQRNA--SAEDIKKAYRKLALKWHPDKNPDnkedaERKFKELSEAYEVLSD 58
Cdd:PHA03102    9 DLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFRE 58
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 3-66 2.59e-05

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 45.41  E-value: 2.59e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1888996968   3 EYYQILGVQR---NASAEDIKKAYRKLALKWHPDKNPDNKEDAERK-FKELSEAYEVLSDANKKNQYD 66
Cdd:COG5269    44 DLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEfFKLIQKAREVLGDRKLRLQYD 111
PHA02624 PHA02624
large T antigen; Provisional
 6-58 2.92e-04

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 42.28  E-value: 2.92e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1888996968   6 QILGVQRNA--SAEDIKKAYRKLALKWHPDKNPDnkedaERKFKELSEAYEVLSD 58
Cdd:PHA02624   15 DLLGLPMAAwgNLPLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKLQE 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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