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gstz1 glutathione S-transferase zeta 1 [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118362512, updated on 20-Mar-2024

Summary

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Gene symbol
gstz1
Gene description
glutathione S-transferase zeta 1
See related
EnsemblRapid:ENSOKEG00005017470
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See gstz1 in Genome Data Viewer
Location:
chromosome: 29
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 29 NC_068449.1 (22865549..22869361, complement)

Chromosome 29 - NC_068449.1Genomic Context describing neighboring genes Neighboring gene transmembrane p24 trafficking protein 8 Neighboring gene uncharacterized LOC118362168 Neighboring gene aldehyde dehydrogenase 6 family, member A1 Neighboring gene basal body-orientation factor 1-like Neighboring gene ectonucleoside triphosphate diphosphohydrolase 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068449.1 Chromosome 29 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutathione transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables maleylacetoacetate isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-phenylalanine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glutathione metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
maleylacetoacetate isomerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068449.1 Reference Oket_V2 Primary Assembly

    Range
    22865549..22869361 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035742895.2 → XP_035598788.1  maleylacetoacetate isomerase isoform X1

    Related
    ENSOKEP00005029578.1, ENSOKET00005034646.1
    Conserved Domains (1) summary
    TIGR01262
    Location:12 → 215
    maiA; maleylacetoacetate isomerase

  2. XM_035742896.1 → XP_035598789.1  maleylacetoacetate isomerase isoform X2

    Related
    ENSOKEP00005029538.1, ENSOKET00005034575.1
    Conserved Domains (1) summary
    TIGR01262
    Location:8 → 211
    maiA; maleylacetoacetate isomerase

  3. XM_052486218.1 → XP_052342178.1  maleylacetoacetate isomerase isoform X3

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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