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lama2 laminin, alpha 2 [ Epinephelus lanceolatus (giant grouper) ]

Gene ID: 117271160, updated on 10-Apr-2024

Summary

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Gene symbol
lama2
Gene description
laminin, alpha 2
See related
EnsemblRapid:ENSELGG00000020402
Gene type
protein coding
RefSeq status
MODEL
Organism
Epinephelus lanceolatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus
Orthologs
human zebrafish all
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Genomic context

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See lama2 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
73
Annotation release Status Assembly Chr Location
100 current ASM528154v1 (GCF_005281545.1) 18 NC_047008.1 (23698403..24031179, complement)

Chromosome 18 - NC_047008.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117271049 Neighboring gene regulator of G-protein signaling 6-like Neighboring gene vesicular inhibitory amino acid transporter-like Neighboring gene protein tyrosine phosphatase receptor type K

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047008.1 Chromosome 18 Reference ASM528154v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Epinephelus lanceolatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM528154v1 Primary Assembly

Genomic

  1. NC_047008.1 Reference ASM528154v1 Primary Assembly

    Range
    23698403..24031179 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033649265.1 → XP_033505156.1  laminin subunit alpha-2

    Related
    ENSELGP00000042789.1, ENSELGT00000046443.1
    Conserved Domains (10) summary
    smart00136
    Location:20 → 270
    LamNT; Laminin N-terminal domain (domain VI)
    smart00180
    Location:1040 → 1084
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    COG1196
    Location:1763 → 2128
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00055
    Location:1086 → 1131
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:3002 → 3153
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam06008
    Location:1591 → 1844
    Laminin_I; Laminin Domain I
    pfam06009
    Location:2044 → 2165
    Laminin_II; Laminin Domain II
    pfam00052
    Location:1227 → 1365
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:1413 → 1459
    Laminin_EGF; Laminin EGF domain
    pfam00054
    Location:2835 → 2962
    Laminin_G_1; Laminin G domain
Nucleotide Protein
Heading Accession and Version

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