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LAMA2 laminin subunit alpha 2 [ Chelonoidis abingdonii (Abingdon island giant tortoise) ]

Gene ID: 116838357, updated on 18-Mar-2024

Summary

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Gene symbol
LAMA2
Gene description
laminin subunit alpha 2
See related
Ensembl:ENSCABG00000004430
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonoidis abingdonii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Chelonoidis
Orthologs
human mouse all
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Genomic context

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See LAMA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
67
Annotation release Status Assembly Chr Location
100 current ASM359739v1 (GCF_003597395.1) Unplaced Scaffold NW_022645886.1 (684636..1044786)

NW_022645886.1Genomic Context describing neighboring genes Neighboring gene vesicular inhibitory amino acid transporter-like Neighboring gene zinc finger BED domain-containing protein 5-like Neighboring gene Rho GTPase activating protein 18 Neighboring gene transmembrane protein 244

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022645886 Unplaced Scaffold Reference ASM359739v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonoidis abingdonii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM359739v1

Genomic

  1. NW_022645886.1 Reference ASM359739v1

    Range
    684636..1044786
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032803474.1 → XP_032659365.1  laminin subunit alpha-2

    UniProtKB/TrEMBL
    A0A8C0GD25
    Related
    ENSCABP00000005930.1, ENSCABT00000006453.1
    Conserved Domains (10) summary
    smart00180
    Location:1162 → 1206
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    COG1196
    Location:1850 → 2167
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00055
    Location:1024 → 1062
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:3109 → 3261
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam06008
    Location:1742 → 1999
    Laminin_I; Laminin Domain I
    pfam06009
    Location:2186 → 2320
    Laminin_II; Laminin Domain II
    pfam00052
    Location:1429 → 1573
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:1255 → 1303
    Laminin_EGF; Laminin EGF domain
    pfam00054
    Location:2961 → 3080
    Laminin_G_1; Laminin G domain
    pfam00055
    Location:146 → 392
    Laminin_N; Laminin N-terminal (Domain VI)
Nucleotide Protein
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