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MCC MCC regulator of WNT signaling pathway [ Phocoena sinus (vaquita) ]

Gene ID: 116751217, updated on 18-Mar-2024

Summary

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Gene symbol
MCC
Gene description
MCC regulator of WNT signaling pathway
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human mouse all
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Genomic context

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See MCC in Genome Data Viewer
Location:
chromosome: 3
Exon count:
19
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 3 NC_045765.1 (80921558..81365486, complement)

Chromosome 3 - NC_045765.1Genomic Context describing neighboring genes Neighboring gene receptor accessory protein 5 Neighboring gene decapping mRNA 2 Neighboring gene uncharacterized LOC116751215 Neighboring gene uncharacterized LOC116751218 Neighboring gene StAR related lipid transfer domain containing 4 Neighboring gene calcium/calmodulin dependent protein kinase IV Neighboring gene small nucleolar RNA SNORA18

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045765.1 Chromosome 3 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: colorectal mutant cancer protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045765.1 Reference mPhoSin1.pri

    Range
    80921558..81365486 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032626783.1 → XP_032482674.1  LOW QUALITY PROTEIN: colorectal mutant cancer protein

    Conserved Domains (3) summary
    COG1196
    Location:208 → 447
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam10506
    Location:589 → 653
    MCC-bdg_PDZ; PDZ domain of MCC-2 bdg protein for Usher syndrome
    pfam13499
    Location:32 → 88
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
Heading Accession and Version

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