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LOC116272742 laminin subunit alpha-1-like [ Papio anubis (olive baboon) ]

Gene ID: 116272742, updated on 9-Nov-2023

Summary

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Gene symbol
LOC116272742
Gene description
laminin subunit alpha-1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
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Genomic context

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See LOC116272742 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
44
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) Unplaced Scaffold NW_022161789.1 (931..75811)

NW_022161789.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103879561 Neighboring gene rho GTPase-activating protein 28-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022161789 Unplaced Scaffold Reference Panubis1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NW_022161789.1 Reference Panubis1.0 Primary Assembly

    Range
    931..75811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031661517.1 → XP_031517377.1  laminin subunit alpha-1-like isoform X1

    Conserved Domains (9) summary
    smart00281
    Location:316 → 447
    LamB; Laminin B domain
    cd00055
    Location:100 → 145
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:1410 → 1566
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    TIGR02168
    Location:824 → 1142
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam06008
    Location:678 → 933
    Laminin_I; Laminin Domain I
    pfam00054
    Location:1856 → 1985
    Laminin_G_1; Laminin G domain
    pfam00053
    Location:5 → 51
    Laminin_EGF; Laminin EGF domain
    pfam06009
    Location:1114 → 1248
    Laminin_II; Laminin Domain II
    cl21504
    Location:465 → 495
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  2. XM_031661518.1 → XP_031517378.1  laminin subunit alpha-1-like isoform X2

    Conserved Domains (9) summary
    smart00281
    Location:316 → 447
    LamB; Laminin B domain
    cd00055
    Location:100 → 145
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:1410 → 1566
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    TIGR02168
    Location:824 → 1142
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam06008
    Location:678 → 933
    Laminin_I; Laminin Domain I
    pfam00054
    Location:1846 → 1975
    Laminin_G_1; Laminin G domain
    pfam00053
    Location:5 → 51
    Laminin_EGF; Laminin EGF domain
    pfam06009
    Location:1114 → 1248
    Laminin_II; Laminin Domain II
    cl21504
    Location:465 → 495
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
Nucleotide Protein
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