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LOC116173566 laminin subunit alpha-1-like [ Photinus pyralis (common eastern firefly) ]

Gene ID: 116173566, updated on 12-Aug-2022

Summary

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Gene symbol
LOC116173566
Gene description
laminin subunit alpha-1-like
Locus tag
PPYR_00575
Gene type
protein coding
RefSeq status
MODEL
Organism
Photinus pyralis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Elateriformia; Elateroidea; Lampyridae; Lampyrinae; Photinus
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Genomic context

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See LOC116173566 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current Ppyr1.3 (GCF_008802855.1) Unplaced Scaffold NW_022170249.1 (16325769..16383643, complement)

NW_022170249.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116158760 Neighboring gene transcription initiation factor TFIID subunit 6-like Neighboring gene uncharacterized LOC116173572 Neighboring gene uncharacterized LOC116181213 Neighboring gene protein SEC13 homolog Neighboring gene mitochondrial ribosomal protein S18A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022170249 Unplaced Scaffold Reference Ppyr1.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular characterization of firefly nuptial gifts: a multi-omics approach sheds light on postcopulatory sexual selection. Al-Wathiqui N, et al. Sci Rep, 2016 Dec 22. PMID 28004739, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
laminin subunit alpha-1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Photinus pyralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ppyr1.3

Genomic

  1. NW_022170249.1 Reference Ppyr1.3

    Range
    16325769..16383643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031491094.1 → XP_031346954.1  laminin subunit alpha-1-like

    UniProtKB/TrEMBL
    A0A5N4B1Z2
    Conserved Domains (7) summary
    smart00180
    Location:269 → 314
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    COG1196
    Location:911 → 1275
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00055
    Location:826 → 861
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2201 → 2354
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00052
    Location:538 → 677
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:222 → 260
    Laminin_EGF; Laminin EGF domain
    pfam05557
    Location:1153 → 1486
    MAD; Mitotic checkpoint protein
Nucleotide Protein
Heading Accession and Version

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