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Nefl neurofilament light chain [ Mastomys coucha (southern multimammate mouse) ]

Gene ID: 116084954, updated on 18-Mar-2024

Summary

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Gene symbol
Nefl
Gene description
neurofilament light chain
See related
EnsemblRapid:ENSMCUG00000008263
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastomys coucha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys
Orthologs
human mouse all
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Genomic context

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See Nefl in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current UCSF_Mcou_1 (GCF_008632895.1) Unplaced Scaffold NW_022196915.1 (54796567..54801917)

NW_022196915.1Genomic Context describing neighboring genes Neighboring gene gonadotropin releasing hormone 1 Neighboring gene dedicator of cytokinesis 5 Neighboring gene phosphate carrier protein, mitochondrial pseudogene Neighboring gene neurofilament medium chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022196915 Unplaced Scaffold Reference UCSF_Mcou_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of postsynaptic intermediate filament cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurofilament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic intermediate filament cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neurofilament light polypeptide

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastomys coucha Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCSF_Mcou_1 Primary Assembly

Genomic

  1. NW_022196915.1 Reference UCSF_Mcou_1 Primary Assembly

    Range
    54796567..54801917
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031362276.1 → XP_031218136.1  neurofilament light polypeptide

    Related
    ENSMCUP00000009320.1, ENSMCUT00000011947.1
    Conserved Domains (2) summary
    pfam00038
    Location:89 → 400
    Filament; Intermediate filament protein
    pfam04732
    Location:9 → 88
    Filament_head; Intermediate filament head (DNA binding) region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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