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LOC115445344 laminin subunit alpha-1 [ Manduca sexta (tobacco hornworm) ]

Gene ID: 115445344, updated on 22-Jun-2021

Summary

Gene symbol
LOC115445344
Gene description
laminin subunit alpha-1
Locus tag
O3G_MSEX007899
Gene type
protein coding
RefSeq status
MODEL
Organism
Manduca sexta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
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Genomic context

See LOC115445344 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
53
Annotation release Status Assembly Chr Location
102 current JHU_Msex_v1.0 (GCF_014839805.1) 23 NC_051137.1 (13592734..13755319)
100 previous assembly Msex_1.0 (GCF_000262585.1) Unplaced Scaffold NW_021942133.1 (335274..499148, complement)

Chromosome 23 - NC_051137.1Genomic Context describing neighboring genes Neighboring gene maltase A1 Neighboring gene maltase A1-like Neighboring gene lost and found Neighboring gene lysosome-associated membrane glycoprotein 1 Neighboring gene sodium/potassium-transporting ATPase subunit beta-2

Genomic regions, transcripts, and products

General protein information

Preferred Names
LOW QUALITY PROTEIN: laminin subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JHU_Msex_v1.0 Primary Assembly

Genomic

  1. NC_051137.1 Reference JHU_Msex_v1.0 Primary Assembly

    Range
    13592734..13755319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037441751.1XP_037297648.1  LOW QUALITY PROTEIN: laminin subunit alpha-1

    Conserved Domains (8) summary
    smart00180
    Location:953998
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:704746
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:25352697
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam06008
    Location:16071858
    Laminin_I; Laminin Domain I
    pfam00052
    Location:12581395
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:423470
    Laminin_EGF; Laminin EGF domain
    cl02806
    Location:53250
    Laminin_N; Laminin N-terminal (Domain VI)
    cl22861
    Location:21652260
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...