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TMTC1 transmembrane O-mannosyltransferase targeting cadherins 1 [ Aquila chrysaetos chrysaetos ]

Gene ID: 115352718, updated on 3-Aug-2024

Summary

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Gene symbol
TMTC1
Gene description
transmembrane O-mannosyltransferase targeting cadherins 1
See related
Ensembl:ENSACCG00020009223
Gene type
protein coding
RefSeq status
MODEL
Organism
Aquila chrysaetos chrysaetos (sub-species: chrysaetos)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Aquila
Orthologs
human mouse all
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Genomic context

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See TMTC1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
20
Annotation release Status Assembly Chr Location
101 current bAquChr1.4 (GCF_900496995.4) 17 NC_044020.1 (11763870..11913610)

Chromosome 17 - NC_044020.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115352720 Neighboring gene uncharacterized LOC115352719 Neighboring gene ovochymase 1 Neighboring gene uncharacterized LOC121232415

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044020.1 Chromosome 17 Reference bAquChr1.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aquila chrysaetos chrysaetos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAquChr1.4

Genomic

  1. NC_044020.1 Reference bAquChr1.4

    Range
    11763870..11913610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030041302.1 → XP_029897162.1  protein O-mannosyl-transferase TMTC1

    UniProtKB/TrEMBL
    A0A663ENH0
    Related
    ENSACCP00020013396.1, ENSACCT00020014006.1
    Conserved Domains (3) summary
    TIGR02917
    Location:540 → 931
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:549 → 577
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:358 → 431
    DUF1736; Domain of unknown function (DUF1736)
Nucleotide Protein
Heading Accession and Version

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