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rela v-rel avian reticuloendotheliosis viral oncogene homolog A [ Salmo trutta (river trout) ]

Gene ID: 115198165, updated on 17-Mar-2024

Summary

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Gene symbol
rela
Gene description
v-rel avian reticuloendotheliosis viral oncogene homolog A
See related
Ensembl:ENSSTUG00000030641
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
zebrafish all
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Genomic context

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See rela in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 8 NC_042964.1 (10991481..11009794, complement)

Chromosome 8 - NC_042964.1Genomic Context describing neighboring genes Neighboring gene dr1-associated corepressor-like Neighboring gene chromosome 8 C11orf68 homolog Neighboring gene serine/threonine-protein phosphatase PP1-beta catalytic subunit-like Neighboring gene equilibrative nucleoside transporter 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042964.1 Chromosome 8 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to cytokine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative transcription factor p65 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042964.1 Reference fSalTru1.1 Primary Assembly

    Range
    10991481..11009794 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029759911.1 → XP_029615771.1  putative transcription factor p65 homolog

    UniProtKB/TrEMBL
    A0A674BEP5, A0A674BFG8
    Related
    ENSSTUP00000069757.1, ENSSTUT00000074103.1
    Conserved Domains (2) summary
    cd01177
    Location:192 → 288
    IPT_NFkappaB; IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to ...
    cl08275
    Location:18 → 185
    RHD-n; N-terminal sub-domain of the Rel homology domain (RHD)
Nucleotide Protein
Heading Accession and Version

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