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LOC115170597 interferon a3-like [ Salmo trutta (river trout) ]

Gene ID: 115170597, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115170597
Gene description
interferon a3-like
See related
Ensembl:ENSSTUG00000040860
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115170597 in Genome Data Viewer
Location:
chromosome: 32
Exon count:
5
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 32 NC_042988.1 (7761185..7763111, complement)

Chromosome 32 - NC_042988.1Genomic Context describing neighboring genes Neighboring gene RAD52 motif containing 1 Neighboring gene interferon beta-like Neighboring gene interferon a3-like Neighboring gene interferon a3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042988.1 Chromosome 32 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon a3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042988.1 Reference fSalTru1.1 Primary Assembly

    Range
    7761185..7763111 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029726858.1 → XP_029582718.1  interferon a3-like

    UniProtKB/TrEMBL
    A0A674DAQ7, A0A674DB44
    Related
    ENSSTUP00000092639.1, ENSSTUT00000098728.1
    Conserved Domains (1) summary
    cl00092
    Location:28 → 179
    IFab; Interferon alpha, beta. Includes also interferon omega and tau. Different from interferon gamma family. Type I interferons(alpha, beta) belong to the larger helical cytokine superfamily, which includes growth hormones, interleukins, several ...
Nucleotide Protein
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