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ogt.1 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [ Betta splendens (Siamese fighting fish) ]

Gene ID: 114864220, updated on 22-May-2024

Summary

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Gene symbol
ogt.1
Gene description
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1
See related
EnsemblRapid:ENSBSLG00000015666
Gene type
protein coding
RefSeq status
MODEL
Organism
Betta splendens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Betta
Also known as
ogt
Orthologs
zebrafish all
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Genomic context

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See ogt.1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_04 current fBetSpl5.4 (GCF_900634795.4) 10 NC_040890.2 (9504371..9516645, complement)
101 previous assembly fBetSpl5.3 (GCF_900634795.3) 10 NC_040890.1 (9504312..9516643, complement)

Chromosome 10 - NC_040890.2Genomic Context describing neighboring genes Neighboring gene olfactory receptor 10G4-like Neighboring gene germ cell nuclear acidic peptidase Neighboring gene FH2 domain containing 2 Neighboring gene ras homolog gene family, member Gd

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_900634795.4-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fBetSpl5.4 Primary Assembly

Genomic

  1. NC_040890.2 Reference fBetSpl5.4 Primary Assembly

    Range
    9504371..9516645 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029164934.3 → XP_029020767.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1

    UniProtKB/TrEMBL
    A0A6P7NLS4
    Related
    ENSBSLP00000033940.1
    Conserved Domains (3) summary
    TIGR02917
    Location:22 → 465
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:293 → 321
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:562 → 1029
    Glyco_transf_41; Glycosyl transferase family 41

  2. XM_029164937.3 → XP_029020770.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X4

    UniProtKB/TrEMBL
    A0A6P7NRX5
    Conserved Domains (3) summary
    TIGR02917
    Location:23 → 455
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:283 → 311
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:546 → 1013
    Glyco_transf_41; Glycosyl transferase family 41

  3. XM_029164936.3 → XP_029020769.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X3

    UniProtKB/TrEMBL
    A0A6P7NTA2
    Conserved Domains (3) summary
    TIGR02917
    Location:23 → 455
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:283 → 311
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:552 → 1019
    Glyco_transf_41; Glycosyl transferase family 41

  4. XM_029164935.3 → XP_029020768.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2

    UniProtKB/TrEMBL
    A0A6P7NS10
    Related
    ENSBSLP00000033778.1
    Conserved Domains (3) summary
    TIGR02917
    Location:22 → 465
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:293 → 321
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:556 → 1023
    Glyco_transf_41; Glycosyl transferase family 41

  5. XM_029164938.3 → XP_029020771.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X5

    UniProtKB/TrEMBL
    A0A6P7NLL0
    Related
    ENSBSLP00000033877.2
    Conserved Domains (3) summary
    TIGR02917
    Location:6 → 289
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:117 → 145
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:386 → 853
    Glyco_transf_41; Glycosyl transferase family 41
Nucleotide Protein
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