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pomgnt2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [ Perca flavescens (yellow perch) ]

Gene ID: 114557049, updated on 15-Mar-2024

Summary

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Gene symbol
pomgnt2
Gene description
protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)
Locus tag
EPR50_G00069530
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Also known as
glyt
Orthologs
human zebrafish all
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Genomic context

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See pomgnt2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 6 NC_041336.1 (32385355..32401914, complement)

Chromosome 6 - NC_041336.1Genomic Context describing neighboring genes Neighboring gene TGF-beta receptor type-2-like Neighboring gene golgi associated kinase 1A Neighboring gene SNF related kinase a Neighboring gene anoctamin 10a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041336.1 Chromosome 6 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein O-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2
Names
glycosyltransferase
glycotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041336.1 Reference PFLA_1.0 Primary Assembly

    Range
    32385355..32401914 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028580300.1 → XP_028436101.1  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A484DAT2
    Conserved Domains (2) summary
    cd00063
    Location:634 → 712
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam04577
    Location:384 → 529
    DUF563; Protein of unknown function (DUF563)
Nucleotide Protein
Heading Accession and Version

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