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CNOT7 CCR4-NOT transcription complex subunit 7 [ Anas platyrhynchos (mallard) ]

Gene ID: 113843488, updated on 11-Apr-2024

Summary

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Gene symbol
CNOT7
Gene description
CCR4-NOT transcription complex subunit 7
Locus tag
Anapl_04584
See related
EnsemblRapid:ENSAPLG00030017296
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
human mouse all
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Genomic context

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See CNOT7 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 4 NC_051775.1 (17590073..17608045, complement)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 4 NC_040049.1 (17809581..17810823, complement)

Chromosome 4 - NC_051775.1Genomic Context describing neighboring genes Neighboring gene mitochondrial calcium uptake family member 3 Neighboring gene zinc finger DHHC-type palmitoyltransferase 2 Neighboring gene VPS37A subunit of ESCRT-I Neighboring gene uncharacterized LOC119716962 Neighboring gene myotubularin related protein 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(A)-specific ribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCR4-NOT complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of CCR4-NOT core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCR4-NOT transcription complex subunit 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051775.1 Reference ZJU1.0 Primary Assembly

    Range
    17590073..17608045 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038179053.1 → XP_038034981.1  CCR4-NOT transcription complex subunit 7

    UniProtKB/TrEMBL
    R0JR16, U3IV27
    Related
    ENSAPLP00030029242.1, ENSAPLT00030044857.1
    Conserved Domains (1) summary
    cl23804
    Location:1 → 279
    CAF1; CAF1 family ribonuclease

  2. XM_038179054.1 → XP_038034982.1  CCR4-NOT transcription complex subunit 7

    UniProtKB/TrEMBL
    R0JR16, U3IV27
    Related
    ENSAPLP00030029217.1, ENSAPLT00030044818.1
    Conserved Domains (1) summary
    cl23804
    Location:1 → 279
    CAF1; CAF1 family ribonuclease
Nucleotide Protein
Heading Accession and Version

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