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LOC112273107 uncharacterized LOC112273107 [ Physcomitrium patens ]

Gene ID: 112273107, updated on 20-Sep-2024

Summary

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Gene symbol
LOC112273107
Gene description
uncharacterized LOC112273107
Locus tag
PHYPA_024871
Gene type
protein coding
RefSeq status
MODEL
Organism
Physcomitrium patens
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium
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Genomic context

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See LOC112273107 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Phypa V3 (GCF_000002425.4) 20 NC_037272.1 (4931155..4940856)

Chromosome 20 - NC_037272.1Genomic Context describing neighboring genes Neighboring gene beta-amylase 2, chloroplastic-like Neighboring gene 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase-like Neighboring gene uncharacterized LOC112273675 Neighboring gene uncharacterized LOC112273234 Neighboring gene chlorophyllase-2, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037272.1 Chromosome 20 Reference Phypa V3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC112273107

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Physcomitrella patens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Phypa V3 Primary Assembly

Genomic

  1. NC_037272.1 Reference Phypa V3 Primary Assembly

    Range
    4931155..4940856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024501505.1 → XP_024357273.1  uncharacterized protein LOC112273107 isoform X1

    Conserved Domains (2) summary
    pfam02151
    Location:224 → 255
    UVR; UvrB/uvrC motif
    cl26527
    Location:189 → 258
    ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein

  2. XM_024501506.1 → XP_024357274.1  uncharacterized protein LOC112273107 isoform X1

    Conserved Domains (2) summary
    pfam02151
    Location:224 → 255
    UVR; UvrB/uvrC motif
    cl26527
    Location:189 → 258
    ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein

  3. XM_024501507.1 → XP_024357275.1  uncharacterized protein LOC112273107 isoform X2

    Conserved Domains (2) summary
    pfam02151
    Location:224 → 255
    UVR; UvrB/uvrC motif
    cl26527
    Location:189 → 258
    ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein

  4. XM_024501508.1 → XP_024357276.1  uncharacterized protein LOC112273107 isoform X3

    Conserved Domains (2) summary
    pfam02151
    Location:224 → 255
    UVR; UvrB/uvrC motif
    cl26527
    Location:189 → 258
    ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein

  5. XM_024501504.1 → XP_024357272.1  uncharacterized protein LOC112273107 isoform X1

    Conserved Domains (2) summary
    pfam02151
    Location:224 → 255
    UVR; UvrB/uvrC motif
    cl26527
    Location:189 → 258
    ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein

  6. XM_024501509.1 → XP_024357277.1  uncharacterized protein LOC112273107 isoform X4

    Conserved Domains (2) summary
    pfam02151
    Location:152 → 183
    UVR; UvrB/uvrC motif
    cl26527
    Location:117 → 186
    ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein

  7. XM_024501510.1 → XP_024357278.1  uncharacterized protein LOC112273107 isoform X5

    Conserved Domains (2) summary
    pfam02151
    Location:57 → 88
    UVR; UvrB/uvrC motif
    cl26527
    Location:22 → 91
    ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein
Nucleotide Protein
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