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LOC110827145 laminin subunit alpha-1 [ Zootermopsis nevadensis ]

Gene ID: 110827145, updated on 10-May-2024

Summary

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Gene symbol
LOC110827145
Gene description
laminin subunit alpha-1
Locus tag
L798_01800
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootermopsis nevadensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Termopsidae; Zootermopsis
Orthologs
fruit fly all
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Genomic context

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See LOC110827145 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
49
Annotation release Status Assembly Chr Location
100 current ZooNev1.0 (GCF_000696155.1) Unplaced Scaffold NW_019059662.1 (53588..209824, complement)

NW_019059662.1Genomic Context describing neighboring genes Neighboring gene monolysocardiolipin acyltransferase Mtpalpha Neighboring gene uncharacterized LOC110827152 Neighboring gene RAS oncogene family member RabX6 Neighboring gene Nfs1 cysteine desulfurase Neighboring gene lost and found Neighboring gene angio-associated migratory cell protein-like Neighboring gene uncharacterized LOC110827136

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019059662 Unplaced Scaffold Reference ZooNev1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zootermopsis nevadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZooNev1.0 Primary Assembly

Genomic

  1. NW_019059662.1 Reference ZooNev1.0 Primary Assembly

    Range
    53588..209824 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022058527.1 → XP_021914219.1  laminin subunit alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A067RR33
    Conserved Domains (9) summary
    smart00180
    Location:1060 → 1105
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2304 → 2447
    LamG; Laminin G domain
    cd00055
    Location:1154 → 1196
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2669 → 2826
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:1011 → 1057
    Laminin_EGF; Laminin EGF domain
    pfam00052
    Location:1364 → 1506
    Laminin_B; Laminin B (Domain IV)
    pfam00055
    Location:55 → 284
    Laminin_N; Laminin N-terminal (Domain VI)
    pfam06008
    Location:1734 → 1971
    Laminin_I; Laminin Domain I
    cl25732
    Location:1709 → 2268
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_022058528.1 → XP_021914220.1  laminin subunit alpha-1 isoform X2

    UniProtKB/TrEMBL
    A0A067RR33
    Conserved Domains (9) summary
    smart00180
    Location:995 → 1040
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2239 → 2382
    LamG; Laminin G domain
    cd00055
    Location:1089 → 1131
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2604 → 2761
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:946 → 992
    Laminin_EGF; Laminin EGF domain
    pfam00052
    Location:1299 → 1441
    Laminin_B; Laminin B (Domain IV)
    pfam00055
    Location:2 → 219
    Laminin_N; Laminin N-terminal (Domain VI)
    pfam06008
    Location:1669 → 1906
    Laminin_I; Laminin Domain I
    cl25732
    Location:1644 → 2203
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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