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LOC110624194 alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial [ Manihot esculenta (cassava) ]

Gene ID: 110624194, updated on 30-Nov-2023

Summary

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Gene symbol
LOC110624194
Gene description
alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial
Locus tag
MANES_10G075600v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Genomic context

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See LOC110624194 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
11
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 10 NC_035170.2 (14117489..14127807)
100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG10 NC_035170.1 (13043560..13051331)

Chromosome 10 - NC_035170.2Genomic Context describing neighboring genes Neighboring gene TIP41-like protein Neighboring gene uncharacterized LOC110623945 Neighboring gene alpha-L-fucosidase 2 Neighboring gene alpha-L-fucosidase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD(P)H dehydrogenase (quinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aerobic electron transport chain IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phylloquinone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035170.2 Reference M.esculenta_v8 Primary Assembly

    Range
    14117489..14127807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021769310.2 → XP_021625002.2  alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2C9V696
    Conserved Domains (2) summary
    PRK15195
    Location:1 → 113
    PRK15195; molecular chaperone FimC
    COG1252
    Location:84 → 523
    Ndh; NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]

  2. XM_043960943.1 → XP_043816878.1  alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A2C9V696
    Conserved Domains (2) summary
    PRK15195
    Location:1 → 113
    PRK15195; molecular chaperone FimC
    cl39093
    Location:84 → 463
    Pyr_redox_2; Pyridine nucleotide-disulphide oxidoreductase
Nucleotide Protein
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