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LAMA1 laminin subunit alpha 1 [ Lonchura striata (white-rumped munia) ]

Gene ID: 110467844, updated on 2-Oct-2024

Summary

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Gene symbol
LAMA1
Gene description
laminin subunit alpha 1
Locus tag
RLOC_00007085
See related
Ensembl:ENSLSDG00000011798
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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See LAMA1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
63
Annotation release Status Assembly Chr Location
RS_2024_09 current lonStrDom2 (GCF_005870125.1) 2 NC_042567.1 (101564376..101661077)

Chromosome 2 - NC_042567.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110467856 Neighboring gene leucine rich repeat containing 30 Neighboring gene Rho GTPase activating protein 28 Neighboring gene transmembrane protein 200C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042567.1 Chromosome 2 Reference lonStrDom2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in animal organ morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_005870125.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042567.1 Reference lonStrDom2 Primary Assembly

    Range
    101564376..101661077
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021525192.2 → XP_021380867.1  laminin subunit alpha-1

    Related
    ENSLSDP00000016400.1
    Conserved Domains (11) summary
    smart00136
    Location:23 → 275
    LamNT; Laminin N-terminal domain (domain VI)
    smart00180
    Location:716 → 739
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2150 → 2289
    LamG; Laminin G domain
    cd00055
    Location:908 → 956
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2316 → 2472
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:958 → 1005
    Laminin_EGF; Laminin EGF domain
    pfam00054
    Location:2752 → 2880
    Laminin_G_1; Laminin G domain
    pfam06009
    Location:2020 → 2154
    Laminin_II; Laminin Domain II
    pfam00052
    Location:1225 → 1367
    Laminin_B; Laminin B (Domain IV)
    pfam06008
    Location:1582 → 1841
    Laminin_I; Laminin Domain I
    cl02488
    Location:1888 → 2104
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
Nucleotide Protein
Heading Accession and Version

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