U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LAMA2 laminin subunit alpha 2 [ Pogona vitticeps (central bearded dragon) ]

Gene ID: 110077555, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
LAMA2
Gene description
laminin subunit alpha 2
See related
Ensembl:ENSPVIG00000013642
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogona vitticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LAMA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
66
Annotation release Status Assembly Chr Location
100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018150824.1 (884242..1437361, complement)

NW_018150824.1Genomic Context describing neighboring genes Neighboring gene L3MBTL histone methyl-lysine binding protein 3 Neighboring gene Rho GTPase activating protein 18 Neighboring gene vesicular inhibitory amino acid transporter-like Neighboring gene uncharacterized LOC110077554

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_018150824.1 Unplaced Scaffold Reference pvi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
laminin subunit alpha-2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pvi1.1

Genomic

  1. NW_018150824.1 Reference pvi1.1

    Range
    884242..1437361 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020790702.1 → XP_020646361.1  laminin subunit alpha-2

    UniProtKB/TrEMBL
    A0A6J0TD05
    Related
    ENSPVIP00000017818.1, ENSPVIT00000022185.1
    Conserved Domains (11) summary
    smart00136
    Location:39 → 287
    LamNT; Laminin N-terminal domain (domain VI)
    smart00180
    Location:969 → 1013
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00281
    Location:1231 → 1366
    LamB; Laminin B domain
    cd00055
    Location:919 → 967
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2967 → 3119
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:471 → 517
    Laminin_EGF; Laminin EGF domain
    pfam00054
    Location:2819 → 2947
    Laminin_G_1; Laminin G domain
    pfam06009
    Location:2039 → 2175
    Laminin_II; Laminin Domain II
    pfam00052
    Location:585 → 724
    Laminin_B; Laminin B (Domain IV)
    pfam06008
    Location:1596 → 1852
    Laminin_I; Laminin Domain I
    cl25732
    Location:1720 → 2083
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.