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LOC109754204 probable galacturonosyltransferase 9 [ Aegilops tauschii ]

Gene ID: 109754204, updated on 11-Jan-2024

Summary

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Gene symbol
LOC109754204
Gene description
probable galacturonosyltransferase 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Aegilops tauschii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Genomic context

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Location:
chromosome: 7D
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Aet v5.0 (GCF_002575655.2) 7D NC_053041.2 (142290135..142293172, complement)
101 previous assembly Aet v4.0 (GCF_002575655.1) 7D NC_053041.1 (142432580..142435628, complement)

Chromosome 7D - NC_053041.2Genomic Context describing neighboring genes Neighboring gene sphinganine C4-monooxygenase 1-like Neighboring gene uncharacterized LOC109754138 Neighboring gene glutathione S-transferase U10-like Neighboring gene FACT complex subunit SPT16-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide identification of novel genetic markers from RNA sequencing assembly of diverse Aegilops tauschii accessions. Nishijima R, et al. Mol Genet Genomics, 2016 Aug. PMID 27142109

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: probable galacturonosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aegilops tauschii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aet v5.0 Primary Assembly

Genomic

  1. NC_053041.2 Reference Aet v5.0 Primary Assembly

    Range
    142290135..142293172 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020313118.3 → XP_020168707.1  LOW QUALITY PROTEIN: probable galacturonosyltransferase 9

    UniProtKB/TrEMBL
    A0A453R6D8
    Conserved Domains (1) summary
    cl28622
    Location:106 → 501
    PLN02870; Probable galacturonosyltransferase
Nucleotide Protein
Heading Accession and Version

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