NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1149820469|ref|XP_020168707|]
View 

LOW QUALITY PROTEIN: probable galacturonosyltransferase 9 [Aegilops tauschii subsp. strangulata]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PLN02523 super family cl30818
galacturonosyltransferase
 106-501 0e+00

galacturonosyltransferase


The actual alignment was detected with superfamily member PLN02523:

Pssm-ID: 215286 [Multi-domain]  Cd Length: 559  Bit Score: 547.17  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 106 GPLPEDARRPLEKEARERIKHARLLAADSKEGFDTQSKIQKLSDTVFAVGEQLARSRRAGRMSSRIAAGSTPKSLHCLAM 185
Cdd:PLN02523  140 SAIDEDVLRQFEKEVKERVKVARQMIAESKESFDNQLKIQKLKDTIFAVNEQLTKAKKNGAFASLIAAKSIPKSLHCLAM 219

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 186 RLLEARLAKSSAFADDP-DPSPAFEDPSLYHYAIFSDNVLAVSVVIASATRAAADPSRHVFHVVTAPMYLPAFRVWFARR 264
Cdd:PLN02523  220 RLMEERIAHPEKYKDEGkPPPPELEDPSLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMR 299

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 265 PPPlGVHVQLIAYSDFPFLNASSSPVFRQIEAGK--------------RDVT-----------LVDYLRFYLPDMFPALQ 319
Cdd:PLN02523  300 DLN-GAHVEVKAVEDYKFLNSSYVPVLRQLESANlqkfyfenklenatKDSSnmkfrnpkylsMLNHLRFYLPEMYPKLH 378

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 320 RVVLLEDDVVVQKDLAALWHVDLDGKVNGAVEMCFGGFRRYRKYLNFTQAIVRDRFSPSACAWEYGVNVFDLEAWRRDGC 399
Cdd:PLN02523  379 RILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKC 458

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 400 TDLFHQYMELNVDGALWDpTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIRGAAVIHFNGNMKPWLDVAFNQY 479
Cdd:PLN02523  459 TEQYHYWQNLNENRTLWK-LGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVIHFNGNMKPWLDIAMNQF 537

                         410       420
                  ....*....|....*....|..
gi 1149820469 480 KALWTKHVDTEMEFLTLCNFGL 501
Cdd:PLN02523  538 KPLWTKYVDYDMEFVQACNFGL 559
 
Name Accession Description Interval E-value
PLN02523 PLN02523
galacturonosyltransferase
 106-501 0e+00

galacturonosyltransferase


Pssm-ID: 215286 [Multi-domain]  Cd Length: 559  Bit Score: 547.17  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 106 GPLPEDARRPLEKEARERIKHARLLAADSKEGFDTQSKIQKLSDTVFAVGEQLARSRRAGRMSSRIAAGSTPKSLHCLAM 185
Cdd:PLN02523  140 SAIDEDVLRQFEKEVKERVKVARQMIAESKESFDNQLKIQKLKDTIFAVNEQLTKAKKNGAFASLIAAKSIPKSLHCLAM 219

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 186 RLLEARLAKSSAFADDP-DPSPAFEDPSLYHYAIFSDNVLAVSVVIASATRAAADPSRHVFHVVTAPMYLPAFRVWFARR 264
Cdd:PLN02523  220 RLMEERIAHPEKYKDEGkPPPPELEDPSLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMR 299

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 265 PPPlGVHVQLIAYSDFPFLNASSSPVFRQIEAGK--------------RDVT-----------LVDYLRFYLPDMFPALQ 319
Cdd:PLN02523  300 DLN-GAHVEVKAVEDYKFLNSSYVPVLRQLESANlqkfyfenklenatKDSSnmkfrnpkylsMLNHLRFYLPEMYPKLH 378

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 320 RVVLLEDDVVVQKDLAALWHVDLDGKVNGAVEMCFGGFRRYRKYLNFTQAIVRDRFSPSACAWEYGVNVFDLEAWRRDGC 399
Cdd:PLN02523  379 RILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKC 458

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 400 TDLFHQYMELNVDGALWDpTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIRGAAVIHFNGNMKPWLDVAFNQY 479
Cdd:PLN02523  459 TEQYHYWQNLNENRTLWK-LGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVIHFNGNMKPWLDIAMNQF 537

                         410       420
                  ....*....|....*....|..
gi 1149820469 480 KALWTKHVDTEMEFLTLCNFGL 501
Cdd:PLN02523  538 KPLWTKYVDYDMEFVQACNFGL 559
GT8_like_1 cd06429
GT8_like_1 represents a subfamily of GT8 with unknown function; A subfamily of ...
 214-488 2.79e-82

GT8_like_1 represents a subfamily of GT8 with unknown function; A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.


Pssm-ID: 133051 [Multi-domain]  Cd Length: 257  Bit Score: 255.78  E-value: 2.79e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 214 YHYAIFSDNVLAVSVVIASATRAAADPSRHVFHVVTAPMYLPAFRVWFARRPPpLGVHVQLIAYSDFPFLNASSSPVFRQ 293
Cdd:cd06429     1 IHVVIFSDNRLAAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPL-KIATVKVLNFDDFKLLGKVKVDSLMQ 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 294 IEAGKRD----------VTLVDYLRFYLPDMFPALQRVVLLEDDVVVQKDLAALWHVDLDGKVNGAVEMcfggfrryrky 363
Cdd:cd06429    80 LESEADTsnlkqrkpeyISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET----------- 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 364 lnftqaivrdrfspsacAWEYGVNVFDLEAWRRDGCTDLFHQYMELNV--DGALWdPTSVLPAGLMTFYGNTKPLDKSWH 441
Cdd:cd06429   149 -----------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQeeEVTLW-KLITLPPGLIVFYGLTSPLDPSWH 210

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1149820469 442 VMGLGYNPSISPEVIRGAAVIHFNGNMKPWLDVAFNQYKALWTKHVD 488
Cdd:cd06429   211 VRGLGYNYGIRPQDIKAAAVLHFNGNMKPWLRTAIPSYKELWEKYLS 257
Glyco_transf_8 pfam01501
Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to ...
 216-475 1.16e-48

Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.


Pssm-ID: 279798 [Multi-domain]  Cd Length: 252  Bit Score: 167.88  E-value: 1.16e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 216 YAIFSDNVLAVSVVIASATRAAADpSRHVFHVVTApmylpafrvwfarrppplGVHVQLIAysDFPFLNASSSPVFRQIE 295
Cdd:pfam01501   4 LALDKNYLLGASVSIKSLLKNNSD-FALNFHIFTD------------------DIPVENLD--ILNWLASSYKPVLPLLE 62

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 296 AGKRDV--------------TLVDYLRFYLPDMFPALQRVVLLEDDVVVQKDLAALWHVDLDGKVNGAVEMcfggfRRYR 361
Cdd:pfam01501  63 SDIKIFeyfsklklrspkywSLLNYLRLYLPDLFPKLDKILYLDADIVVQGDLSPLWDIDLGGKVLAAVED-----NYFQ 137

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 362 KYLNFTQAIVRDRFSPSACAWEYGVNVFDLEAWRRDGCTDLFHQYMELNVDGALWDPTSvLPAGLMTFYGNTKPLDKSWH 441
Cdd:pfam01501 138 RYPNFSEPIILENFGPPACYFNAGMLLFDLDAWRKENITERYIKWLNLNENRTLWKLGD-QDPLNIVFYGKVKPLDPRWN 216

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1149820469 442 VMGLGY-NPSISPEVIRG-AAVIHFNGNMKPWLDVA 475
Cdd:pfam01501 217 VLGLGYyNKKKSLNEITEnAAVIHYNGPTKPWLDIA 252
RfaJ COG1442
Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope ...
 306-483 1.31e-11

Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441051 [Multi-domain]  Cd Length: 301  Bit Score: 65.38  E-value: 1.31e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 306 YLRFYLPDMFPAlqrvvlleddvVVQK------------DLAALWHVDLDGKVNGAVEMCFGGFR--RYRKYLNFTQAiv 371
Cdd:COG1442    88 YYRLLIPELLPD-----------DYDKvlyldadtlvlgDLSELWDIDLGGNLLAAVRDGTVTGSqkKRAKRLGLPDD-- 154

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 372 rdrfspsacaWEY---GVNVFDLEAWRRDGCTDLFHQYMELNVDGALW---DptsVLPAglmTFYGNTKPLDKSWHVMG- 444
Cdd:COG1442   155 ----------DGYfnsGVLLINLKKWREENITEKALEFLKENPDKLKYpdqD---ILNI---VLGGKVKFLPPRYNYQYs 218

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1149820469 445 ------LGYNPSISPEVIRGAAVIHFNGNMKPWLDVAFNQYKALW 483
Cdd:COG1442   219 lyyelkDKSNKKELLEARKNPVIIHYTGPTKPWHKWCTHPYADLY 263
 
Name Accession Description Interval E-value
PLN02523 PLN02523
galacturonosyltransferase
 106-501 0e+00

galacturonosyltransferase


Pssm-ID: 215286 [Multi-domain]  Cd Length: 559  Bit Score: 547.17  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 106 GPLPEDARRPLEKEARERIKHARLLAADSKEGFDTQSKIQKLSDTVFAVGEQLARSRRAGRMSSRIAAGSTPKSLHCLAM 185
Cdd:PLN02523  140 SAIDEDVLRQFEKEVKERVKVARQMIAESKESFDNQLKIQKLKDTIFAVNEQLTKAKKNGAFASLIAAKSIPKSLHCLAM 219

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 186 RLLEARLAKSSAFADDP-DPSPAFEDPSLYHYAIFSDNVLAVSVVIASATRAAADPSRHVFHVVTAPMYLPAFRVWFARR 264
Cdd:PLN02523  220 RLMEERIAHPEKYKDEGkPPPPELEDPSLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMR 299

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 265 PPPlGVHVQLIAYSDFPFLNASSSPVFRQIEAGK--------------RDVT-----------LVDYLRFYLPDMFPALQ 319
Cdd:PLN02523  300 DLN-GAHVEVKAVEDYKFLNSSYVPVLRQLESANlqkfyfenklenatKDSSnmkfrnpkylsMLNHLRFYLPEMYPKLH 378

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 320 RVVLLEDDVVVQKDLAALWHVDLDGKVNGAVEMCFGGFRRYRKYLNFTQAIVRDRFSPSACAWEYGVNVFDLEAWRRDGC 399
Cdd:PLN02523  379 RILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKC 458

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 400 TDLFHQYMELNVDGALWDpTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIRGAAVIHFNGNMKPWLDVAFNQY 479
Cdd:PLN02523  459 TEQYHYWQNLNENRTLWK-LGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVIHFNGNMKPWLDIAMNQF 537

                         410       420
                  ....*....|....*....|..
gi 1149820469 480 KALWTKHVDTEMEFLTLCNFGL 501
Cdd:PLN02523  538 KPLWTKYVDYDMEFVQACNFGL 559
PLN02742 PLN02742
Probable galacturonosyltransferase
 103-499 1.34e-115

Probable galacturonosyltransferase


Pssm-ID: 215395 [Multi-domain]  Cd Length: 534  Bit Score: 351.00  E-value: 1.34e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 103 ASRGPLPEDARRPLEKEARERIKHARLLAADSKEGFDT-QSKIQKLSDTVFAVGEQlarSRRAGRmssrIAAGSTPKSLH 181
Cdd:PLN02742  121 TRGEPITVEEAEPIIRDLAALIYQAQDLHYDSATTIMTlKAHIQALEERANAATVQ---STKFGQ----LAAEALPKSLY 193

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 182 CLAMRLLEARLAKSS--AFADDPDPSPAFEDPSLYHYAIFSDNVLAVSVVIASATRAAADPSRHVFHVVTAPMYLPAFRV 259
Cdd:PLN02742  194 CLGVRLTTEWFKNPKlqRKAEEKRNSPRLVDNNLYHFCVFSDNILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQA 273

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 260 WFARRPPPlGVHVQLIAYSDFPFLNASSSPVFRQIE----------AGKRD------------VTLVDYLRFYLPDMFPA 317
Cdd:PLN02742  274 WFAMNDFK-GVTVEVQKIEEFSWLNASYVPVLKQLQdsdtqsyyfsGSQDDgkteikfrnpkyLSMLNHLRFYIPEIYPA 352

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 318 LQRVVLLEDDVVVQKDLAALWHVDLDGKVNGAVEMCFGGFRRYRKYLNFTQAIVRDRFSPSACAWEYGVNVFDLEAWRRD 397
Cdd:PLN02742  353 LEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNFSHPLISSHFDPDACGWAFGMNVFDLVAWRKA 432

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 398 GCTDLFHQYMELNVDGALWDpTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIRGAAVIHFNGNMKPWLDVAFN 477
Cdd:PLN02742  433 NVTAIYHYWQEQNVDRTLWK-LGTLPPGLLTFYGLTEPLDRRWHVLGLGYDTNIDPRLIESAAVLHFNGNMKPWLKLAIE 511

                         410       420
                  ....*....|....*....|..
gi 1149820469 478 QYKALWTKHVDTEMEFLTLCNF 499
Cdd:PLN02742  512 RYKPLWERYVNYSHPYLQQCNF 533
PLN02829 PLN02829
Probable galacturonosyltransferase
 116-498 1.73e-112

Probable galacturonosyltransferase


Pssm-ID: 215443 [Multi-domain]  Cd Length: 639  Bit Score: 346.45  E-value: 1.73e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 116 LEKEARERIKHARLLAADSKE-GFDTQSKIQKLSDTVFAVGEQLARSRRAGRMSSRIAAGSTPKSLHCLAMRLLEARLAK 194
Cdd:PLN02829  234 LPKNANEKLKAMEQTLAKGKQmQDDCSIVVKKLRAMLHSAEEQLRVHKKQTMFLTQLTAKTLPKGLHCLPLRLTTEYYNL 313

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 195 SSAFADDPDpSPAFEDPSLYHYAIFSDNVLAVSVVIASATRAAADPSRHVFHVVTAPMYLPAFRVWFARRPPPLG-VHVQ 273
Cdd:PLN02829  314 NSSEQQFPN-QEKLEDPQLYHYALFSDNVLAAAVVVNSTVTNAKHPSKHVFHIVTDRLNYAAMRMWFLVNPPGKAtIQVQ 392

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 274 LIaySDFPFLNASSSPVFRQIEA----------------------GKRDVTLVDYLRFYLPDMFPALQRVVLLEDDVVVQ 331
Cdd:PLN02829  393 NI--EEFTWLNSSYSPVLKQLGSqsmidyyfrahransdsnlkyrNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQ 470

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 332 KDLAALWHVDLDGKVNGAVEMCFGGFRRYRKYLNFTQAIVRDRFSPSACAWEYGVNVFDLEAWRRDGCTDLFHQYMELNV 411
Cdd:PLN02829  471 KDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNH 550

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 412 DGALWDpTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIRGAAVIHFNGNMKPWLDVAFNQYKALWTKHVDTEM 491
Cdd:PLN02829  551 DRQLWK-LGTLPPGLITFWKRTYPLDRSWHVLGLGYNPNVNQRDIERAAVIHYNGNMKPWLEIGIPKYRNYWSKYVDYDQ 629


                  ....*..
gi 1149820469 492 EFLTLCN 498
Cdd:PLN02829  630 VYLRECN 636
PLN02910 PLN02910
polygalacturonate 4-alpha-galacturonosyltransferase
 126-498 3.45e-106

polygalacturonate 4-alpha-galacturonosyltransferase


Pssm-ID: 215493 [Multi-domain]  Cd Length: 657  Bit Score: 330.76  E-value: 3.45e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 126 HARLLAADskEGFDTQSKIQKLSDTVFAVGEQLARSRRAGRMSSRIAAGSTPKSLHCLAMRLLEARLAKSSAFADDPDpS 205
Cdd:PLN02910  261 HVLSIAKD--QLYDCHTMARKLRAMLQSTERKVDALKKKSAFLIQLAAKTVPKPLHCLPLQLAADYFLLGFQNKDYVN-K 337

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 206 PAFEDPSLYHYAIFSDNVLAVSVVIASATRAAADPSRHVFHVVTAPMYLPAFRVWFaRRPPPLGVHVQLIAYSDFPFLNA 285
Cdd:PLN02910  338 KKLEDPSLYHYAIFSDNVLATSVVVNSTVLHAKEPQKHVFHIVTDKLNFAAMKMWF-IINPPAKATIQVENIDDFKWLNS 416

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 286 SSSPVFRQIEAGK--------------------------RDVTLVDYLRFYLPDMFPALQRVVLLEDDVVVQKDLAALWH 339
Cdd:PLN02910  417 SYCSVLRQLESARikeyyfkanhpsslsagadnlkyrnpKYLSMLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWS 496

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 340 VDLDGKVNGAVEMCFGGFRRYRKYLNFTQAIVRDRFSPSACAWEYGVNVFDLEAWRRDGCTDLFHQYMELNVDGALWDPT 419
Cdd:PLN02910  497 IDMQGMVNGAVETCKESFHRFDKYLNFSNPKISENFDPNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLG 576

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1149820469 420 SvLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIRGAAVIHFNGNMKPWLDVAFNQYKALWTKHVDTEMEFLTLCN 498
Cdd:PLN02910  577 S-LPPGLITFYNLTYPLDRSWHVLGLGYDPALNQTEIENAAVVHYNGNYKPWLDLAIAKYKPYWSRYVQYDNPYLQLCN 654
PLN02718 PLN02718
Probable galacturonosyltransferase
 146-498 9.66e-100

Probable galacturonosyltransferase


Pssm-ID: 178320 [Multi-domain]  Cd Length: 603  Bit Score: 312.21  E-value: 9.66e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 146 KLSDTVFAVGEQLARSRRAGRMSSRIAAGSTPKSLHCLAMRLlearlaKSSAFADDPD-----PSPAFEDPSLYHYAIFS 220
Cdd:PLN02718  247 KLRAMTYNTEEQVRAQKNQAAYLMQLAARTTPKGLHCLSMRL------TAEYFALDPEkrqlpNQQRYNDPDLYHYVVFS 320

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 221 DNVLAVSVVIASATRAAADPSRHVFHVVTAPMYLPAFRVWFARRPPPLGVhVQLIAYSDFPFLNAS-SSPVFRQIEAGKR 299
Cdd:PLN02718  321 DNVLACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNPPGKAT-IQILNIDDMNVLPADyNSLLMKQNSHDPR 399

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 300 DVTLVDYLRFYLPDMFPALQRVVLLEDDVVVQKDLAALWHVDLDGKVNGAVEMCFGG---FRRYRKYLNFTQAIVRDRFS 376
Cdd:PLN02718  400 YISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGepsFRSMDTFINFSDPWVAKKFD 479

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 377 PSACAWEYGVNVFDLEAWRRDGCTDLFHQYMELNVDGALWDPTSvLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVI 456
Cdd:PLN02718  480 PKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGS-LPIGWLTFYNQTVALDKRWHVLGLGHESGVGASDI 558

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1149820469 457 RGAAVIHFNGNMKPWLDVAFNQYKALWTKHVDTEMEFLTLCN 498
Cdd:PLN02718  559 EQAAVIHYDGVMKPWLDIGIGKYKRYWNIHVPYHHPYLQQCN 600
PLN02870 PLN02870
Probable galacturonosyltransferase
 138-498 5.95e-86

Probable galacturonosyltransferase


Pssm-ID: 215468 [Multi-domain]  Cd Length: 533  Bit Score: 274.51  E-value: 5.95e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 138 FDTQSKIQKLSDTVFAVGEQLARSRRAGRMSSRIAAGSTPKSLHCLAMRLLEARLAKSSAFADDPDPS--PAFEDPSLYH 215
Cdd:PLN02870  129 YDAKTFAFVLRAMMEKFERELRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARKQLPSPEllPVLSDNSYHH 208

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 216 YAIFSDNVLAVSVVIASATRAAADPSRHVFHVVTAPMYLPAFRVWFARRPPPLGVhVQLIAYSDFPFLNASSSPVFRQIE 295
Cdd:PLN02870  209 FVLSTDNILAASVVVSSTVQSSLKPEKIVFHVITDKKTYAGMHSWFALNSVSPAI-VEVKGVHQFDWLTRENVPVLEAVE 287

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 296 A--GKRD-------------------------------VTLVDYLRFYLPDMFPALQRVVLLEDDVVVQKDLAALWHVDL 342
Cdd:PLN02870  288 ShnGIRNyyhgnhiaganlsettprtfasklqarspkyISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDL 367

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 343 DGKVNGAVEMCFGG-----FRRYRKYLNFTQAIVRDRFSPSACAWEYGVNVFDLEAWRRDGCTDLFHQYMELNVDG--AL 415
Cdd:PLN02870  368 GGKVNGAVETCRGEdewvmSKRFRNYFNFSHPLIAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSnlTM 447

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 416 WDpTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIRGAAVIHFNGNMKPWLDVAFNQYKALWTKHVDTEMEFLT 495
Cdd:PLN02870  448 WK-LGTLPPALIAFKGHVHPIDPSWHMLGLGYQSKTNIESVKKAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSNDFIR 526


                  ...
gi 1149820469 496 LCN 498
Cdd:PLN02870  527 NCH 529
GT8_like_1 cd06429
GT8_like_1 represents a subfamily of GT8 with unknown function; A subfamily of ...
 214-488 2.79e-82

GT8_like_1 represents a subfamily of GT8 with unknown function; A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.


Pssm-ID: 133051 [Multi-domain]  Cd Length: 257  Bit Score: 255.78  E-value: 2.79e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 214 YHYAIFSDNVLAVSVVIASATRAAADPSRHVFHVVTAPMYLPAFRVWFARRPPpLGVHVQLIAYSDFPFLNASSSPVFRQ 293
Cdd:cd06429     1 IHVVIFSDNRLAAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPL-KIATVKVLNFDDFKLLGKVKVDSLMQ 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 294 IEAGKRD----------VTLVDYLRFYLPDMFPALQRVVLLEDDVVVQKDLAALWHVDLDGKVNGAVEMcfggfrryrky 363
Cdd:cd06429    80 LESEADTsnlkqrkpeyISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET----------- 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 364 lnftqaivrdrfspsacAWEYGVNVFDLEAWRRDGCTDLFHQYMELNV--DGALWdPTSVLPAGLMTFYGNTKPLDKSWH 441
Cdd:cd06429   149 -----------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQeeEVTLW-KLITLPPGLIVFYGLTSPLDPSWH 210

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1149820469 442 VMGLGYNPSISPEVIRGAAVIHFNGNMKPWLDVAFNQYKALWTKHVD 488
Cdd:cd06429   211 VRGLGYNYGIRPQDIKAAAVLHFNGNMKPWLRTAIPSYKELWEKYLS 257
PLN02659 PLN02659
Probable galacturonosyltransferase
 138-498 2.14e-79

Probable galacturonosyltransferase


Pssm-ID: 215356 [Multi-domain]  Cd Length: 534  Bit Score: 257.27  E-value: 2.14e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 138 FDTQSKIQKLSDTVfAVGEQLARSRRAGRMSSR-IAAGSTPKSLHCLAMRLLEARLAKSSAFADDPDPS--PAFEDPSLY 214
Cdd:PLN02659  130 SDARAFALKLREMV-TLLEQRTRTAKIQEYLYRhVASSSIPKQLHCLALRLANEHSTNAAARLQLPLAElvPALVDNSYF 208

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 215 HYAIFSDNVLAVSVVIASATRAAADPSRHVFHVVTAPMYLPAFRVWFARRPPPLGVhVQLIAYSDFPFLNASSSPVFRQI 294
Cdd:PLN02659  209 HFVLASDNILAASVVANSLVQNALRPHKFVLHIITDRKTYSPMQAWFSLHPLSPAI-IEVKALHHFDWFAKGKVPVLEAM 287

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 295 EAGKRDVT---------------------------------LVDYLRFYLPDMFPALQRVVLLEDDVVVQKDLAALWHVD 341
Cdd:PLN02659  288 EKDQRVRSqfrggssaivanntekphviaaklqalspkynsVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDID 367

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 342 LDGKVNGAVEMCFGG-----FRRYRKYLNFTQAIVRDRFSPSACAWEYGVNVFDLEAWRRDGCTDLFHQYMELNV--DGA 414
Cdd:PLN02659  368 MNGKVNGAVETCRGEdkfvmSKKLKSYLNFSHPLIAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLksDLS 447

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 415 LWDpTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIRGAAVIHFNGNMKPWLDVAFNQYKALWTKHVDTEMEFL 494
Cdd:PLN02659  448 LWQ-LGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTSLADAESAGVVHFNGRAKPWLDIAFPQLRPLWAKYIDSSDKFI 526


                  ....
gi 1149820469 495 TLCN 498
Cdd:PLN02659  527 KSCH 530
PLN02867 PLN02867
Probable galacturonosyltransferase
 138-497 1.52e-74

Probable galacturonosyltransferase


Pssm-ID: 178458 [Multi-domain]  Cd Length: 535  Bit Score: 244.81  E-value: 1.52e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 138 FDTQSKIQKLSDTVfavgeQLARSRRAgrMSSRIAAGSTPKSLHCLAMRLLEARLAKSSAFADDPDPSPA--FEDPSLYH 215
Cdd:PLN02867  141 FRTKAMLLKMERKV-----QSARQRES--IYWHLASHGIPKSLHCLCLKLAEEYAVNAMARSRLPPPESVsrLTDPSFHH 213

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 216 YAIFSDNVLAVSVVIASATRAAADPSRHVFHVVTAPMYLPAFRVWFARRPPPLGV------------------------- 270
Cdd:PLN02867  214 VVLLTDNVLAASVVISSTVQNAANPEKLVFHIVTDKKTYTPMHAWFAINSIKSAVvevkglhqydwsqevnvgvkemlei 293

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 271 -------HVQLIAYSDFPFLNASSspvfRQIEA-GKRDVTLVDYLRFYLPDMFPALQRVVLLEDDVVVQKDLAALWHVDL 342
Cdd:PLN02867  294 hrliwshYYQNLKESDFQFEGTHK----RSLEAlSPSCLSLLNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDL 369

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 343 DGKVNGAV------EMCFGGfRRYRKYLNFTQAIVRDRFSPSACAWEYGVNVFDLEAWRRDGCTDLFHQYMELNVDGA-- 414
Cdd:PLN02867  370 NGKVVGAVvdswcgDNCCPG-RKYKDYLNFSHPLISSNLDQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGlq 448

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 415 LWDPtSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISP-EVIRGAAVIHFNGNMKPWLDVAFNQYKALWTKHVDTEMEF 493
Cdd:PLN02867  449 LWQP-GALPPALLAFKGHVHPIDPSWHVAGLGSRPPEVPrEILESAAVLHFSGPAKPWLEIGFPEVRSLWYRHVNFSDKF 527


                  ....
gi 1149820469 494 LTLC 497
Cdd:PLN02867  528 IRKC 531
PLN02769 PLN02769
Probable galacturonosyltransferase
 170-498 3.06e-73

Probable galacturonosyltransferase


Pssm-ID: 215412 [Multi-domain]  Cd Length: 629  Bit Score: 243.45  E-value: 3.06e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 170 RIAAGSTPKSLHCLAMRLLeARLAKSSAFADDPDPSPAFEDPSLYHYAIFSDNVLAVSVVIASATRAAADPSRHVFHVVT 249
Cdd:PLN02769  288 QLGVQTMPKSHHCLSMRLT-VEYFKSSSLDMEDSNSEKFSDPSLRHYVIFSKNVLAASVVINSTVVHSRESGNIVFHVLT 366

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 250 APMYLPAFRVWFARRPPpLGVHVQLIAYSDFPFLNASSSPV------------FRQIE--AGKRDVTlvDYL------RF 309
Cdd:PLN02769  367 DAQNYYAMKHWFDRNSY-KEAAVQVLNIEDLILKDLDKFALkqlslpeefrvsFRSVDnpSSKQMRT--EYLsvfshsHF 443

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 310 YLPDMFPALQRVVLLEDDVVVQKDLAALWHVDLDGKVNGAVEMC---FGGFRRYRKylnftqaivRDRFSPSACAWEYGV 386
Cdd:PLN02769  444 LLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCgvrLGQLKNYLG---------DTNFDTNSCAWMSGL 514

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 387 NVFDLEAWRRDGCTDLFHQYM-ELNVDGALWDPTSVLPAGLMTFYGNTKPLDKSWHVMGLGYNPSISPEVIRGAAVIHFN 465
Cdd:PLN02769  515 NVIDLDKWRELDVTETYLKLLqKFSKDGEESLRAAALPASLLTFQDLIYPLDDRWVLSGLGHDYGIDEQAIKKAAVLHYN 594

                         330       340       350
                  ....*....|....*....|....*....|...
gi 1149820469 466 GNMKPWLDVAFNQYKALWTKHVDTEMEFLTLCN 498
Cdd:PLN02769  595 GNMKPWLELGIPKYKKYWKRFLNRDDRFMDECN 627
Glyco_transf_8 pfam01501
Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to ...
 216-475 1.16e-48

Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.


Pssm-ID: 279798 [Multi-domain]  Cd Length: 252  Bit Score: 167.88  E-value: 1.16e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 216 YAIFSDNVLAVSVVIASATRAAADpSRHVFHVVTApmylpafrvwfarrppplGVHVQLIAysDFPFLNASSSPVFRQIE 295
Cdd:pfam01501   4 LALDKNYLLGASVSIKSLLKNNSD-FALNFHIFTD------------------DIPVENLD--ILNWLASSYKPVLPLLE 62

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 296 AGKRDV--------------TLVDYLRFYLPDMFPALQRVVLLEDDVVVQKDLAALWHVDLDGKVNGAVEMcfggfRRYR 361
Cdd:pfam01501  63 SDIKIFeyfsklklrspkywSLLNYLRLYLPDLFPKLDKILYLDADIVVQGDLSPLWDIDLGGKVLAAVED-----NYFQ 137

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 362 KYLNFTQAIVRDRFSPSACAWEYGVNVFDLEAWRRDGCTDLFHQYMELNVDGALWDPTSvLPAGLMTFYGNTKPLDKSWH 441
Cdd:pfam01501 138 RYPNFSEPIILENFGPPACYFNAGMLLFDLDAWRKENITERYIKWLNLNENRTLWKLGD-QDPLNIVFYGKVKPLDPRWN 216

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1149820469 442 VMGLGY-NPSISPEVIRG-AAVIHFNGNMKPWLDVA 475
Cdd:pfam01501 217 VLGLGYyNKKKSLNEITEnAAVIHYNGPTKPWLDIA 252
GT8_A4GalT_like cd04194
A4GalT_like proteins catalyze the addition of galactose or glucose residues to the ...
 219-473 5.18e-13

A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface; The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.


Pssm-ID: 133037 [Multi-domain]  Cd Length: 248  Bit Score: 68.78  E-value: 5.18e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 219 FSDN-VLAVSVVIASAtRAAADPSRHVFHVVTapMYLP-AFRVWFARRPPPLGVHVQLIAYSDFPFLNASSSpvfrqiea 296
Cdd:cd04194     7 IDDNyAPYLAVTIKSI-LANNSKRDYDFYILN--DDISeENKKKLKELLKKYNSSIEFIKIDNDDFKFFPAT-------- 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 297 gKRDVTLVDYLRFYLPDMFPALQRvvlleddvvvQKDLAALWHVDLDGKVNGAVEMCFGGFRRYRKYLnftqAIVRDRFS 376
Cdd:cd04194    76 -TDHISYATYYRLLIPDLLPDYDKvlyldadiivLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRR----LGGYDDGS 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 377 psacaweY---GVNVFDLEAWRRDGCTDLFHQYMELNvDGALWDPT-SVLPaglMTFYGNTKPLDKSWHVM-GLGYNPSI 451
Cdd:cd04194   151 -------YfnsGVLLINLKKWREENITEKLLELIKEY-GGRLIYPDqDILN---AVLKDKILYLPPRYNFQtGFYYLLKK 219

                         250       260
                  ....*....|....*....|....*....
gi 1149820469 452 SP-------EVIRGAAVIHFNGNMKPWLD 473
Cdd:cd04194   220 KSkeeqeleEARKNPVIIHYTGSDKPWNK 248
RfaJ COG1442
Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope ...
 306-483 1.31e-11

Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441051 [Multi-domain]  Cd Length: 301  Bit Score: 65.38  E-value: 1.31e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 306 YLRFYLPDMFPAlqrvvlleddvVVQK------------DLAALWHVDLDGKVNGAVEMCFGGFR--RYRKYLNFTQAiv 371
Cdd:COG1442    88 YYRLLIPELLPD-----------DYDKvlyldadtlvlgDLSELWDIDLGGNLLAAVRDGTVTGSqkKRAKRLGLPDD-- 154

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 372 rdrfspsacaWEY---GVNVFDLEAWRRDGCTDLFHQYMELNVDGALW---DptsVLPAglmTFYGNTKPLDKSWHVMG- 444
Cdd:COG1442   155 ----------DGYfnsGVLLINLKKWREENITEKALEFLKENPDKLKYpdqD---ILNI---VLGGKVKFLPPRYNYQYs 218

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1149820469 445 ------LGYNPSISPEVIRGAAVIHFNGNMKPWLDVAFNQYKALW 483
Cdd:COG1442   219 lyyelkDKSNKKELLEARKNPVIIHYTGPTKPWHKWCTHPYADLY 263
Glyco_transf_8 cd00505
Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis ...
 214-471 4.17e-11

Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis; Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.


Pssm-ID: 132996 [Multi-domain]  Cd Length: 246  Bit Score: 63.23  E-value: 4.17e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 214 YHYAIFSDNVLAVSVVIA---SATRAAADPSRhvFHVVTAPMyLPAFRVWFARRPPPLGVHVQLIAYsDFPFLNASSSPv 290
Cdd:cd00505     1 IAIVIVATGDEYLRGAIVlmkSVLRHRTKPLR--FHVLTNPL-SDTFKAALDNLRKLYNFNYELIPV-DILDSVDSEHL- 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 291 frqieagKRDVTLVDYLRFYLPDMFPALQRVVLLEDDVVVQKDLAALWHVDLDGKVNGAVEMCFggFRRYRKYLNFTQAI 370
Cdd:cd00505    76 -------KRPIKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPG--DRREGKYYRQKRSH 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1149820469 371 V--RDRFSPsacaweyGVNVFDLEAWRR-DGCTDLFHQYMELNVDGALWDPTsvLPAGLmtFYGNTKP---LDKSWHVMG 444
Cdd:cd00505   147 LagPDYFNS-------GVFVVNLSKERRnQLLKVALEKWLQSLSSLSGGDQD--LLNTF--FKQVPFIvksLPCIWNVRL 215

                         250       260
                  ....*....|....*....|....*....
gi 1149820469 445 LGYNPSI--SPEVIRGAAVIHFNGNMKPW 471
Cdd:cd00505   216 TGCYRSLncFKAFVKNAKVIHFNGPTKPW 244
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH