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CD109 CD109 molecule [ Gekko japonicus ]

Gene ID: 107123186, updated on 14-Mar-2024

Summary

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Gene symbol
CD109
Gene description
CD109 molecule
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
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Genomic context

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See CD109 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
33
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015175992.1 (575272..745660)

NW_015175992.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation elongation factor 1 alpha 1 Neighboring gene solute carrier family 17 member 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015175992.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD109 antigen

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015175992.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    575272..745660
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015426374.1 → XP_015281860.1  CD109 antigen

    Conserved Domains (6) summary
    cd02897
    Location:916 → 1204
    A2M_2; Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester ...
    pfam00207
    Location:699 → 789
    A2M; Alpha-2-macroglobulin family
    pfam01835
    Location:149 → 240
    A2M_N; MG2 domain
    pfam07677
    Location:1324 → 1408
    A2M_recep; A-macroglobulin receptor
    pfam07678
    Location:968 → 1203
    A2M_comp; A-macroglobulin complement component
    pfam07703
    Location:470 → 597
    A2M_N_2; Alpha-2-macroglobulin family N-terminal region
Nucleotide Protein
Heading Accession and Version

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