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rexo4 REX4 homolog, 3'-5' exonuclease [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106954969, updated on 13-Mar-2024

Summary

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Gene symbol
rexo4
Gene description
REX4 homolog, 3'-5' exonuclease
See related
Ensembl:ENSPLAG00000010487
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See rexo4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113309.1 (227961..233084, complement)

NW_015113309.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily A member 7-like Neighboring gene potassium voltage-gated channel, Shaw-related subfamily, member 3b Neighboring gene putative nuclease HARBI1 Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class P Neighboring gene protein tyrosine phosphatase receptor type H

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113309.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA exonuclease 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113309.1 Reference P_latipinna-1.0

    Range
    227961..233084 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015044850.1 → XP_014900336.1  RNA exonuclease 4

    UniProtKB/TrEMBL
    A0A3B3U5W6
    Related
    ENSPLAP00000008029.1, ENSPLAT00000003574.1
    Conserved Domains (2) summary
    cd06144
    Location:236 → 387
    REX4_like; DEDDh 3'-5' exonuclease domain of RNA exonuclease 4, XPMC2, Interferon Stimulated Gene product of 20 kDa, and similar proteins
    COG0847
    Location:236 → 386
    DnaQ; DNA polymerase III, epsilon subunit or related 3'-5' exonuclease [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

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