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Rcd5 microspherule protein Rcd5 [ Dinoponera quadriceps ]

Gene ID: 106743642, updated on 10-Oct-2024

Summary

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Gene symbol
Rcd5
Gene description
microspherule protein Rcd5
Gene type
protein coding
RefSeq status
MODEL
Organism
Dinoponera quadriceps
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Ponerinae; Ponerini; Dinoponera
Orthologs
fruit fly honey bee all
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Genomic context

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See Rcd5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM131382v1 (GCF_001313825.1) Unplaced Scaffold NW_014555233.1 (495307..498982)

NW_014555233.1Genomic Context describing neighboring genes Neighboring gene Patched-related Neighboring gene eukaryotic translation initiation factor 3 subunit J Neighboring gene uncharacterized LOC106743641 Neighboring gene uncharacterized LOC106743603

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014555233.1 Unplaced Scaffold Reference ASM131382v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G-quadruplex RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ino80 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of MLL1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of NSL complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
microspherule protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dinoponera quadriceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM131382v1

Genomic

  1. NW_014555233.1 Reference ASM131382v1

    Range
    495307..498982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014617680.1 → XP_014473166.1  microspherule protein 1

    UniProtKB/TrEMBL
    A0A6P3X467
    Conserved Domains (2) summary
    cd00060
    Location:354 → 454
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam13325
    Location:143 → 340
    MCRS_N; N-terminal region of micro-spherule protein
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases