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UMOD uromodulin [ Microcebus murinus (gray mouse lemur) ]

Gene ID: 105855225, updated on 13-Mar-2024

Summary

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Gene symbol
UMOD
Gene description
uromodulin
See related
Ensembl:ENSMICG00000011148
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcebus murinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
Orthologs
human mouse all
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Genomic context

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See UMOD in Genome Data Viewer
Location:
chromosome: 17
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Mmur_3.0 (GCF_000165445.2) 17 NC_033676.1 (12960229..12974302)
100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012198986.1 (1582726..1596799, complement)

Chromosome 17 - NC_033676.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase medium chain family member 5 Neighboring gene protein disulfide isomerase like, testis expressed Neighboring gene uncharacterized LOC105855222 Neighboring gene uncharacterized LOC105855224 Neighboring gene glycoprotein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neutrophil migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uromodulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmur_3.0 Primary Assembly

Genomic

  1. NC_033676.1 Reference Mmur_3.0 Primary Assembly

    Range
    12960229..12974302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012736079.1 → XP_012591533.1  uromodulin isoform X2

    UniProtKB/TrEMBL
    A0A8C5UYP7, A0A8C5VU19
    Related
    ENSMICP00000010154.3, ENSMICT00000011148.3
    Conserved Domains (5) summary
    smart00241
    Location:333 → 582
    ZP; Zona pellucida (ZP) domain
    cd00054
    Location:107 → 148
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00100
    Location:462 → 582
    Zona_pellucida; Zona pellucida-like domain
    pfam07645
    Location:64 → 102
    EGF_CA; Calcium-binding EGF domain
    cl21504
    Location:33 → 62
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  2. XM_012736078.1 → XP_012591532.1  uromodulin isoform X1

    UniProtKB/TrEMBL
    A0A8B7EB75, A0A8C5VU19
    Conserved Domains (5) summary
    smart00241
    Location:372 → 621
    ZP; Zona pellucida (ZP) domain
    cd00054
    Location:146 → 187
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00100
    Location:501 → 621
    Zona_pellucida; Zona pellucida-like domain
    pfam07645
    Location:103 → 141
    EGF_CA; Calcium-binding EGF domain
    cl21504
    Location:72 → 101
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
Nucleotide Protein
Heading Accession and Version

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