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LOC105523014 solute carrier family 45 member 3 [ Colobus angolensis palliatus ]

Gene ID: 105523014, updated on 22-Oct-2023

Summary

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Gene symbol
LOC105523014
Gene description
solute carrier family 45 member 3
See related
Ensembl:ENSCANG00000039623
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
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Genomic context

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See LOC105523014 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012117921.1 (418998..468578)

NW_012117921.1Genomic Context describing neighboring genes Neighboring gene RAB29, member RAS oncogene family Neighboring gene nuclear casein kinase and cyclin dependent kinase substrate 1 Neighboring gene gamma-aminobutyric acid receptor-associated protein-like Neighboring gene major facilitator superfamily domain containing 4A Neighboring gene cyclin dependent kinase 18

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012117921.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sucrose:proton symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 45 member 3; uncharacterized protein LOC105523014

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012117921.1 Reference Cang.pa_1.0

    Range
    418998..468578
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011957728.1 → XP_011813118.1  uncharacterized protein LOC105523014 isoform X1

    Conserved Domains (4) summary
    cd06174
    Location:18 → 403
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    smart00413
    Location:456 → 527
    ETS; erythroblast transformation specific domain
    pfam04929
    Location:676 → 762
    Herpes_DNAp_acc; Herpes DNA replication accessory factor
    pfam07690
    Location:18 → 407
    MFS_1; Major Facilitator Superfamily

  2. XM_011957729.1 → XP_011813119.1  solute carrier family 45 member 3 isoform X2

    UniProtKB/TrEMBL
    A0A2K5JSU2
    Related
    ENSCANP00000031902.1, ENSCANT00000055123.1
    Conserved Domains (2) summary
    TIGR01301
    Location:18 → 350
    GPH_sucrose; GPH family sucrose/H+ symporter
    cl21472
    Location:18 → 178
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
Nucleotide Protein
Heading Accession and Version

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