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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference Pbar_UMD_V03
Genomic
-
NW_011933712.1 Reference Pbar_UMD_V03
- Range
-
1176278..1319369 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011643118.1 → XP_011641420.1 laminin subunit alpha-1 isoform X1
- UniProtKB/TrEMBL
-
A0A6I9WFL8
- Related
- XP_011641420.1, XM_011643118.1
- Conserved Domains (11) summary
-
- smart00180
Location:973 → 1017
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:1068 → 1115
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:3042 → 3199
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam00052
Location:580 → 718
- Laminin_B; Laminin B (Domain IV)
- pfam00053
Location:1020 → 1066
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:73 → 288
- Laminin_N; Laminin N-terminal (Domain VI)
- pfam02210
Location:2894 → 3018
- Laminin_G_2; Laminin G domain
- pfam06008
Location:1719 → 1940
- Laminin_I; Laminin Domain I
- pfam06009
Location:2085 → 2260
- Laminin_II; Laminin Domain II
- pfam12795
Location:2026 → 2240
- MscS_porin; Mechanosensitive ion channel porin domain
- cl22861
Location:2279 → 2421
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
-
XM_011643119.2 → XP_011641421.1 laminin subunit alpha-1 isoform X2
- UniProtKB/TrEMBL
-
A0A6I9X9Q5
- Related
- XP_011641421.1, XM_011643119.2
- Conserved Domains (10) summary
-
- cd00055
Location:757 → 804
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- cd00110
Location:2731 → 2888
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam00052
Location:1035 → 1156
- Laminin_B; Laminin B (Domain IV)
- pfam00053
Location:709 → 755
- Laminin_EGF; Laminin EGF domain
- pfam01500
Location:750 → 907
- Keratin_B2; Keratin, high sulfur B2 protein
- pfam02210
Location:2583 → 2707
- Laminin_G_2; Laminin G domain
- pfam06008
Location:1408 → 1629
- Laminin_I; Laminin Domain I
- pfam06009
Location:1774 → 1949
- Laminin_II; Laminin Domain II
- pfam12795
Location:1715 → 1929
- MscS_porin; Mechanosensitive ion channel porin domain
- cl22861
Location:1968 → 2110
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...