4PLM,4AQT,4AQS,2Y38,3ZYJ


Conserved Protein Domain Family
Laminin_N

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pfam00055: Laminin_N (this model, PSSM-Id:278484 is obsolete and has been replaced by 459653)
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Laminin N-terminal (Domain VI)
Statistics
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PSSM-Id: 278484
Aligned: 160 rows
Threshold Bit Score: 188.502
Created: 10-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4PLM_A         37 FGKEVKVSSTCG-KPPSRYCVVTEk--G-------Eeq-------------------------------vR--S------ 67   chicken
XP_003112253   58 tnslIMSTATCGqYSTEEYCKLVE---HvllrkttNtq-------------------------------sP--Q------ 95   Caenorhabditi...
XP_006571727   19 akADIFVNATCGeEGPETFCKPSE---S-------S-------------------------------------R------ 45   honey bee
XP_002064753  164 srATITVNATCGqNGAEEYCKLVDaypH-------Pnw-------------------------------aK--Q------ 197  Drosophila wi...
XP_008194088   63 tkaiISANATCGeNGREEFCRM-----L-------Egg-------------------------------kG--R------ 91   red flour beetle
XP_317647      13 lrATISVNATCGqTGREEYCRLAE---G-------Agr-------------------------------sRgsQ------ 45   Anopheles gam...
GAA52816       18 ENAEITANATCGeHRREYYCRLVE---H-------AdgaliykrlererrqvmtyfqqqprsyrdpsgqwV--Q------ 79   Clonorchis si...
CDS33692       69 EHAIINANATCGeRKREYYCRLVE---H-------Agydfaallr-----------------ikrqvfsnQ--Kdartfk 119  Hymenolepis m...
NP_723870     162 prAQISVNATCGqNGAEEYCKQVGa---------------------------------------------K--P------ 188  fruit fly
XP_002428616   41 kHADILVNGTCGaNRPEVYCRRPT---D-------Kea-------------------------------rKanQ------ 73   human body louse
4PLM_A         68 --------C--HLCN--AS--DpkraHPPSFLTDlnnPH------NLTCWQS---D---S---YVQy--pHNVTLTLSLG 116  chicken
XP_003112253   96 --------C--DICD--AN--NvhkrHPIEYAID----G------TRRWWQS---PslaN---GLDy---EKVNITIDLR 142  Caenorhabditi...
XP_006571727   46 --------C--GVCD--ARspDpgkrHNISNILDsspG---------KWWQS---P---T---LARgdryEYVTIVLDLK 95   honey bee
XP_002064753  198 --------C--GTCNahSS--DrskqRPIESLISsgsSY------DESWWQS---P---TlqgGRQf---EYVTITLDLK 250  Drosophila wi...
XP_008194088   92 --------C--GICDnfST--DpgkkHPISYAID----G------THRWWQS---PalfY---GSKy---EYVTITIDLK 140  red flour beetle
XP_317647      46 --------C--GICD--ANnpDpekrHPITNIVD----G------TNSWWQS---P---TlqkGAKn---DRVTINLDLG 94   Anopheles gam...
GAA52816       80 --------C--SFCD--AR--NeslrHPIEFVr---sGE------PHLWWQS---P---SlaeGLKy---HAVTITMDFK 127  Clonorchis si...
CDS33692      120 dvdgtvieC--NYCD--AR--DpslrHPIEYAVS---GD------NNLWWQS---P---SlaeGLQy---HAVTIDIDLK 175  Hymenolepis m...
NP_723870     189 --------C--GICNahSS--DrakqRSIQSLISsgsGSgsgsgfEEGWWQS---P---TlqgGRQf---EYVTILLDLK 247  fruit fly
XP_002428616   74 --------CipTLCD--Sk------kNGIKKTIDgskDS----------WISptlE---N---GLEy---EYITITLDLK 118  human body louse
4PLM_A        117 KKFEVTYVSLQFC-S--PRPESMAIYKSMDyGKTWVPFQFYS---TQ---CRKMYn--------KP-S-RAa-iT-K-Q- 173  chicken
XP_003112253  143 QEYQVAYVIIKMGnA--PRPGTWVLEKSLD-GENYEPWQYFAmqdAE---CMRQFg--------IP-A-TTgvpR-F-Q- 203  Caenorhabditi...
XP_006571727   96 QVYQIEYVIVKAAnS--PRPAAWILEKSVD-GENFQPWQYYApsdEE---CWTRYs--------VP-P-VTg-kP-I-Fi 156  honey bee
XP_002064753  251 QTYQIFFVTLKSAnS--PRPASWILEKSLD-GINYEPWQYFGlsdAD---CKRRWn--------LS-G-ENg-kY-FfQ- 311  Drosophila wi...
XP_008194088  141 QIYQITDIIIKSAnS--LRPGTWILERSLe-GKNYEPWQYFA---RNdkeCFERFg--------IPgT-KGk-pH-Y-F- 201  red flour beetle
XP_317647      95 QLYQIVFFTMRAAiS--PLPAAWVLEKSMD-GRAYDAWQYFA---ADdteCRERFg--------LP-AyTAn-yI-F-K- 155  Anopheles gam...
GAA52816      128 QVYQIVYVLLRMGdS--PRPANWILERSLD-GQNYKPWVFFAeseYD---CKRLYepllegpltVT-S-GPr-pW-K-L- 195  Clonorchis si...
CDS33692      176 QVYQIVFILLRMGdS--PRPANWILEKSID-GKDFQPWVFFA---ENaqqCMSMFq--------PT-M-NGt-lR-I-T- 235  Hymenolepis m...
NP_723870     248 QTFQIFSVWLKSAnS--PRPASWILEKSLD-GINFEPWQYFGlsdAD---CQRRWn--------LS-G-QNg-kYvF-Q- 308  fruit fly
XP_002428616  119 QVYQVAYVTIK-A-SiaPLPVAWVLERSLD-GLNFFPWQYFAessGE---CRRRYg--------MP-A-SQp-kP-I-F- 178  human body louse
4PLM_A        174 N-E--------QEAICTDSHTDVRPlsGGLIAFSTLDGRP--TAHDFD------NS----PVLQDWVTATDIKVTFSRLH 232  chicken
XP_003112253  204 R-D--------DEVHCTSEYSKITPleNGEIHTSLVNGRP--GAEK--------PS----LELQKFTRARFVRLRLVSPR 260  Caenorhabditi...
XP_006571727  157 G-D--------DDVICTSVYSRQTPmeNGEIHTHLVNGRP--GA--LN------HS----TTLQEFTQARYVRLRLQGVR 213  honey bee
XP_002064753  312 N-D--------TEVICSTQFSKPLPleNGEIHVSLLKNRP--GA--ME------QT----PELQKFITARYMRIRLQGMH 368  Drosophila wi...
XP_008194088  202 T-D--------TEIICTSFYSKLTPmeNGEIHTSLINGRP--GAN--E------SS----PELLEFTKARYVRLRLMGLR 258  red flour beetle
XP_317647     156 S-D--------TEVICSTQFSSLEPleNGEINLSIISGRP--SEMI--------TS----PELQNFTLARYVRIRLLRMQ 212  Anopheles gam...
GAA52816      196 E-D--------DEVYCTTYYSQPQAlqSGEIIVTLSLDRA--STISTTlgleraVS----PKLIDFLSARYVRLRFQKLQ 260  Clonorchis si...
CDS33692      236 S-DsrphklgnTEVYCTTYFSQPQNlqAGEIIIPLTVDREgaSASYLE------ASkpidPELIEFLSARFVRLRFQKLQ 308  Hymenolepis m...
NP_723870     309 N-D--------TEIICSTQFSKPGPleNGVLHASLLKNRP--GAT--D------QS----PELMKFITTRYIRIRLQGMH 365  fruit fly
XP_002428616  179 KtD--------DEVICLINYSKLYYidNQEVHVSLINGRP--SFNY--------TS----EILRNFTLARYVRFKFQKIH 236  human body louse
4PLM_A        233 ----TF-G------DE----NeD--------DselardSYFYAVSDLQVGG 260  chicken
XP_003112253  261 ----TL-N------AD----LmIinkkshslDksv-tmRYFYSISDISIGG 295  Caenorhabditis remanei
XP_006571727  214 ----RN-G------ET----IgDk-------------rRAFYSIKEINVGG 236  honey bee
XP_002064753  369 ----ST-AnldnsvDW----LlD--------Sqsl-ekRSFYSLKQLRVsa 401  Drosophila willistoni
XP_008194088  259 gtvePL-P------YW----FsQ--------Dilk-ekKLFYTIRDISIVG 289  red flour beetle
XP_317647     213 ----SA-E------AQ----RfKtkc--fmcTksf-ssRSFYTIRSLRIGG 245  Anopheles gambiae str. PEST
GAA52816      261 ----TLsG------DWmampNqL--------Dssv-ynRYYYSIRTIKVGG 292  Clonorchis sinensis
CDS33692      309 ----TLsG------DWmtlrDqL--------Dptv-ynRYYYSIRNIKIGG 340  Hymenolepis microstoma
NP_723870     366 ----ST-AnqdnslDW----LlD--------Spsl-ekHSFYSLSQLKVsa 398  fruit fly
XP_002428616  237 ----KTe---------------K--------Dlil-rkKLFYSIKNIIIGG 259  human body louse
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