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CLEC17A C-type lectin domain containing 17A [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105308517, updated on 30-Mar-2024

Summary

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Gene symbol
CLEC17A
Gene description
C-type lectin domain containing 17A
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human all
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Genomic context

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See CLEC17A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011889364.1 (438157..450192)

NW_011889364.1Genomic Context describing neighboring genes Neighboring gene trans-2,3-enoyl-CoA reductase Neighboring gene uncharacterized LOC111733596 Neighboring gene NADH:ubiquinone oxidoreductase subunit B7 Neighboring gene multifunctional methyltransferase subunit TRM112-like protein pseudogene Neighboring gene adhesion G protein-coupled receptor E3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011889364 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: C-type lectin domain family 17, member A
Names
C-type lectin domain family 17 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011889364.1 Reference Pvam_2.0

    Range
    438157..450192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023525615.1 → XP_023381383.1  LOW QUALITY PROTEIN: C-type lectin domain family 17, member A

    UniProtKB/TrEMBL
    A0A6P6C1V6
    Conserved Domains (2) summary
    cd03590
    Location:223 → 343
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam05956
    Location:30 → 143
    APC_basic; APC basic domain
Nucleotide Protein
Heading Accession and Version

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