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LAMA2 laminin subunit alpha 2 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105291179, updated on 30-Mar-2024

Summary

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Gene symbol
LAMA2
Gene description
laminin subunit alpha 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See LAMA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
66
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888824.1 (2285410..2676989, complement)

NW_011888824.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L5-like Neighboring gene 5S ribosomal RNA Neighboring gene Rho GTPase activating protein 18 Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene glutathione S-transferase P pseudogene Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888824 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888824.1 Reference Pvam_2.0

    Range
    2285410..2676989 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023529836.1 → XP_023385604.1  laminin subunit alpha-2

    UniProtKB/TrEMBL
    A0A6P6CDY3
    Conserved Domains (11) summary
    smart00180
    Location:905 → 949
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00281
    Location:1167 → 1301
    LamB; Laminin B domain
    cd00055
    Location:855 → 903
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2816 → 2968
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:998 → 1046
    Laminin_EGF; Laminin EGF domain
    pfam00054
    Location:2668 → 2796
    Laminin_G_1; Laminin G domain
    pfam06009
    Location:1913 → 2048
    Laminin_II; Laminin Domain II
    pfam00052
    Location:502 → 642
    Laminin_B; Laminin B (Domain IV)
    pfam00055
    Location:20 → 256
    Laminin_N; Laminin N-terminal (Domain VI)
    pfam06008
    Location:1470 → 1727
    Laminin_I; Laminin Domain I
    cl25732
    Location:1610 → 1952
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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