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wb wing blister [ Acromyrmex echinatior (Panamanian leafcutter ant) ]

Gene ID: 105149529, updated on 10-Oct-2024

Summary

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Gene symbol
wb
Gene description
wing blister
Locus tag
G5I_09754
See related
EnsemblRapid:LOC105149529
Gene type
protein coding
RefSeq status
MODEL
Organism
Acromyrmex echinatior
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Acromyrmex
Orthologs
fruit fly honey bee all
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Genomic context

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Location:
chromosome: Un
Exon count:
46
Annotation release Status Assembly Chr Location
100 current Aech_3.9 (GCF_000204515.1) Unplaced Scaffold NW_011627302.1 (202300..371417, complement)

NW_011627302.1Genomic Context describing neighboring genes Neighboring gene leukocyte receptor cluster member 8 homolog Neighboring gene uncharacterized LOC105149526 Neighboring gene protein kinase, cAMP-dependent, regulatory subunit type 1 Neighboring gene calmodulin-regulated spectrin-associated protein patronin Neighboring gene hypothetical protein Neighboring gene phospholipase A1 member A-like Neighboring gene lost and found

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011627302.1 Unplaced Scaffold Reference Aech_3.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
laminin subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acromyrmex echinatior Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aech_3.9

Genomic

  1. NW_011627302.1 Reference Aech_3.9

    Range
    202300..371417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011061997.1 → XP_011060299.1  laminin subunit alpha-1 isoform X1

    See identical proteins and their annotated locations for XP_011060299.1

    Related
    XP_011060299.1, XM_011061997.1
    Conserved Domains (11) summary
    smart00180
    Location:1065 → 1110
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2275 → 2414
    LamG; Laminin G domain
    cd00055
    Location:1622 → 1656
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:3027 → 3184
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00052
    Location:576 → 714
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:1016 → 1062
    Laminin_EGF; Laminin EGF domain
    pfam00055
    Location:71 → 284
    Laminin_N; Laminin N-terminal (Domain VI)
    pfam02210
    Location:2879 → 3003
    Laminin_G_2; Laminin G domain
    pfam05714
    Location:1766 → 1948
    Borrelia_lipo_1; Borrelia burgdorferi virulent strain associated lipoprotein
    pfam06009
    Location:2109 → 2256
    Laminin_II; Laminin Domain II
    pfam12795
    Location:2022 → 2236
    MscS_porin; Mechanosensitive ion channel porin domain

  2. XM_011061995.1 → XP_011060297.1  laminin subunit alpha-1 isoform X1

    See identical proteins and their annotated locations for XP_011060297.1

    Related
    XP_011060297.1, XM_011061995.1
    Conserved Domains (11) summary
    smart00180
    Location:1065 → 1110
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2275 → 2414
    LamG; Laminin G domain
    cd00055
    Location:1622 → 1656
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:3027 → 3184
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00052
    Location:576 → 714
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:1016 → 1062
    Laminin_EGF; Laminin EGF domain
    pfam00055
    Location:71 → 284
    Laminin_N; Laminin N-terminal (Domain VI)
    pfam02210
    Location:2879 → 3003
    Laminin_G_2; Laminin G domain
    pfam05714
    Location:1766 → 1948
    Borrelia_lipo_1; Borrelia burgdorferi virulent strain associated lipoprotein
    pfam06009
    Location:2109 → 2256
    Laminin_II; Laminin Domain II
    pfam12795
    Location:2022 → 2236
    MscS_porin; Mechanosensitive ion channel porin domain

  3. XM_011061996.1 → XP_011060298.1  laminin subunit alpha-1 isoform X1

    See identical proteins and their annotated locations for XP_011060298.1

    Related
    XP_011060298.1, XM_011061996.1
    Conserved Domains (11) summary
    smart00180
    Location:1065 → 1110
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2275 → 2414
    LamG; Laminin G domain
    cd00055
    Location:1622 → 1656
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:3027 → 3184
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00052
    Location:576 → 714
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:1016 → 1062
    Laminin_EGF; Laminin EGF domain
    pfam00055
    Location:71 → 284
    Laminin_N; Laminin N-terminal (Domain VI)
    pfam02210
    Location:2879 → 3003
    Laminin_G_2; Laminin G domain
    pfam05714
    Location:1766 → 1948
    Borrelia_lipo_1; Borrelia burgdorferi virulent strain associated lipoprotein
    pfam06009
    Location:2109 → 2256
    Laminin_II; Laminin Domain II
    pfam12795
    Location:2022 → 2236
    MscS_porin; Mechanosensitive ion channel porin domain

  4. XM_011061994.1 → XP_011060296.1  laminin subunit alpha-1 isoform X1

    See identical proteins and their annotated locations for XP_011060296.1

    Related
    XP_011060296.1, XM_011061994.1
    Conserved Domains (11) summary
    smart00180
    Location:1065 → 1110
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2275 → 2414
    LamG; Laminin G domain
    cd00055
    Location:1622 → 1656
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:3027 → 3184
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00052
    Location:576 → 714
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:1016 → 1062
    Laminin_EGF; Laminin EGF domain
    pfam00055
    Location:71 → 284
    Laminin_N; Laminin N-terminal (Domain VI)
    pfam02210
    Location:2879 → 3003
    Laminin_G_2; Laminin G domain
    pfam05714
    Location:1766 → 1948
    Borrelia_lipo_1; Borrelia burgdorferi virulent strain associated lipoprotein
    pfam06009
    Location:2109 → 2256
    Laminin_II; Laminin Domain II
    pfam12795
    Location:2022 → 2236
    MscS_porin; Mechanosensitive ion channel porin domain

  5. XM_011061998.1 → XP_011060300.1  laminin subunit alpha-1 isoform X2

    Related
    XP_011060300.1, XM_011061998.1
    Conserved Domains (11) summary
    smart00180
    Location:750 → 795
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:1960 → 2099
    LamG; Laminin G domain
    cd00055
    Location:1307 → 1341
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2712 → 2869
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00052
    Location:1027 → 1148
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:701 → 747
    Laminin_EGF; Laminin EGF domain
    pfam02210
    Location:2564 → 2688
    Laminin_G_2; Laminin G domain
    pfam05791
    Location:1524 → 1639
    Bacillus_HBL; Bacillus haemolytic enterotoxin (HBL)
    pfam06008
    Location:1400 → 1621
    Laminin_I; Laminin Domain I
    pfam06009
    Location:1794 → 1941
    Laminin_II; Laminin Domain II
    pfam12795
    Location:1707 → 1921
    MscS_porin; Mechanosensitive ion channel porin domain
Nucleotide Protein
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