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SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein [ Homo sapiens (human) ]

Gene ID: 10492, updated on 7-Apr-2024

Summary

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Official Symbol
SYNCRIPprovided by HGNC
Official Full Name
synaptotagmin binding cytoplasmic RNA interacting proteinprovided by HGNC
Primary source
HGNC:HGNC:16918
See related
Ensembl:ENSG00000135316 MIM:616686; AllianceGenome:HGNC:16918
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PP68; NSAP1; GRYRBP; HNRNPQ; HNRPQ1; GRY-RBP; hnRNP-Q
Summary
This gene encodes a member of the cellular heterogeneous nuclear ribonucleoprotein (hnRNP) family. hnRNPs are RNA binding proteins that complex with heterogeneous nuclear RNA (hnRNA) and regulate alternative splicing, polyadenylation, and other aspects of mRNA metabolism and transport. The encoded protein plays a role in multiple aspects of mRNA maturation and is associated with several multiprotein complexes including the apoB RNA editing-complex and survival of motor neurons (SMN) complex. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, and a pseudogene of this gene is located on the short arm of chromosome 20. [provided by RefSeq, Dec 2011]
Expression
Ubiquitous expression in thyroid (RPKM 21.7), appendix (RPKM 18.1) and 25 other tissues See more
Orthologs
mouse all
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Genomic context

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See SYNCRIP in Genome Data Viewer
Location:
6q14.3
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (85607784..85643870, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (86824588..86863388, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (86317502..86352604, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17366 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24787 Neighboring gene 5'-nucleotidase ecto Neighboring gene ReSE screen-validated silencer GRCh37_chr6:86210956-86211197 Neighboring gene sorting nexin 14 Neighboring gene Sharpr-MPRA regulatory region 13581 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:86262889-86263390 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:86263391-86263890 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:86302067-86302652 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:86302653-86303236 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:86303237-86303820 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17368 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17369 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17370 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:86378928-86379449 Neighboring gene MPRA-validated peak5939 silencer Neighboring gene pyruvate kinase M1/2 pseudogene 3 Neighboring gene small nucleolar RNA, C/D box 50A Neighboring gene small nucleolar RNA host gene 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Further evidence for de novo variants in SYNCRIP as the cause of a neurodevelopmental disorder. Semino F, et al. Hum Mutat, 2021 Sep. PMID 34157790
  2. A novel antisense lncRNA NT5E promotes progression by modulating the expression of SYNCRIP and predicts a poor prognosis in pancreatic cancer. Zhang P, et al. J Cell Mol Med, 2020 Sep. PMID 32770626, Free PMC Article
  3. ATP binds nucleic-acid-binding domains beyond RRM fold. He Y, et al. Biochem Biophys Res Commun, 2020 Feb 19. PMID 31791586
  4. The acidic domain is a unique structural feature of the splicing factor SYNCRIP. Beuck C, et al. Protein Sci, 2016 Aug. PMID 27081926, Free PMC Article
  5. Identification of proteins specifically interacting with YB-1 mRNA 3' UTR and the effect of hnRNP Q on YB-1 mRNA translation. Lyabin DN, et al. Biochemistry (Mosc), 2013 Jun. PMID 23980891

See all (278) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Oculopharyngeal muscular dystrophy mutations link the RNA-binding protein HNRNPQ to autophagosome biogenesis.
    Title: Oculopharyngeal muscular dystrophy mutations link the RNA-binding protein HNRNPQ to autophagosome biogenesis.
  2. Further evidence for de novo variants in SYNCRIP as the cause of a neurodevelopmental disorder.
    Title: Further evidence for de novo variants in SYNCRIP as the cause of a neurodevelopmental disorder.
  3. A novel antisense lncRNA NT5E promotes progression by modulating the expression of SYNCRIP and predicts a poor prognosis in pancreatic cancer.
    Title: A novel antisense lncRNA NT5E promotes progression by modulating the expression of SYNCRIP and predicts a poor prognosis in pancreatic cancer.
  4. ATP binds nucleic-acid-binding domains beyond RRM fold.
    Title: ATP binds nucleic-acid-binding domains beyond RRM fold.
  5. the terminal loop of pri-let-7a was shown to be the main contributor for its interaction with SYNCRIP. Functional studies demonstrated that the SYNCRIP RRM2-3 domain can promote the processing of pri-let-7a
    Title: SYNCRIP, a new player in pri-let-7a processing.
  6. Identification of the frequent presence of hnRNP R and hnRNP Q in frontotemporal lobar degeneration (FTLD)-FUS inclusions suggests a potential role for these hnRNPs in FTLD-FUS pathogenesis and supports the role of dysfunctional RNA metabolism in FTLD.
    Title: Heterogeneous nuclear ribonucleoproteins R and Q accumulate in pathological inclusions in FTLD-FUS.
  7. Results indentified two candidate haploinsufficient genes contiguous at 6q14 SYNCRIP (encoding hnRNP-Q) and SNHG5 (that hosts snoRNAs), both involved in regulating RNA maturation and translation inT-cell acute lymphoblastic leukemia (T-ALL).
    Title: Deletion 6q Drives T-cell Leukemia Progression by Ribosome Modulation.
  8. The EGF/hnRNP Q1-induced translation of Aurora-A mRNA is mediated by the mTOR and ERK pathways.
    Title: The EGF/hnRNP Q1 axis is involved in tumorigenesis via the regulation of cell cycle-related genes.
  9. A cryptic RNA-binding domain mediates Syncrip recognition and exosomal partitioning of miRNA targets.
    Title: A cryptic RNA-binding domain mediates Syncrip recognition and exosomal partitioning of miRNA targets.
  10. our data indicate that hnRNP Q1 is a novel trans-acting factor that binds to Aurora-A mRNA 5'-UTRs and regulates its translation, which increases cell proliferation and contributes to tumorigenesis in colorectal cancer
    Title: Translational upregulation of Aurora-A by hnRNP Q1 contributes to cell proliferation and tumorigenesis in colorectal cancer.
Submit: New GeneRIF Correction See all GeneRIFs (24)

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

HIV-1 interactions

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Protein interactions

Protein Gene Interaction Pubs
Envelope surface glycoprotein gp120 env Tandem affinity purification and mass spectrometry analysis identify heterogeneous nuclear ribonucleoprotein Q (HNRNPQ; SYNCRIP), HIV-1 Gag, Gag/Pol, gp120, and Nef incorporated into staufen1 RNP complexes isolated from HIV-1-expressing cells PubMed
Gag-Pol gag-pol Tandem affinity purification and mass spectrometry analysis identify heterogeneous nuclear ribonucleoprotein Q (HNRNPQ; SYNCRIP), HIV-1 Gag, Gag/Pol, gp120, and Nef incorporated into staufen1 RNP complexes isolated from HIV-1-expressing cells PubMed
Nef nef Tandem affinity purification and mass spectrometry analysis identify heterogeneous nuclear ribonucleoprotein Q (HNRNPQ; SYNCRIP), HIV-1 Gag, Gag/Pol, gp120, and Nef incorporated into staufen1 RNP complexes isolated from HIV-1-expressing cells PubMed
Pr55(Gag) gag hnRNP Q overexpression in HIV-1 infected HeLa cells increases levels of the HIV-1 Gag-p24 protein, while levels of viral Rev-dependent mRNAs are not affected PubMed
gag Tandem affinity purification and mass spectrometry analysis identify heterogeneous nuclear ribonucleoprotein Q (HNRNPQ; SYNCRIP), HIV-1 Gag, Gag/Pol, gp120, and Nef incorporated into staufen1 RNP complexes isolated from HIV-1-expressing cells PubMed
Rev rev hnRNP Q overexpression increases levels of reporter proteins in a Rev-dependent manner PubMed
rev HIV-1 Rev interacting protein, synaptotagmin binding, cytoplasmic RNA interacting protein, is identified by the in-vitro binding experiments involving cytosolic or nuclear extracts from HeLa cells. The interaction of Rev with SYNCRIP is increased by RRE PubMed
rev HIV-1 Rev involves its amino acids 9-14 for specific binding to the heterogeneous nuclear ribonucleoproteins (hnRNP) Q PubMed
capsid gag hnRNP Q overexpression in HIV-1 infected HeLa cells increases levels of the HIV-1 Gag-p24 protein, while levels of viral Rev-dependent mRNAs are not affected PubMed

Go to the HIV-1, Human Interaction Database

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • FLJ31626

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables RNA binding HDA PubMed 
enables mRNA 5'-UTR binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in CRD-mediated mRNA stabilization IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in CRD-mediated mRNA stabilization IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in CRD-mediated mRNA stabilization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in RNA processing TAS
Traceable Author Statement
more info
 PubMed 
involved_in RNA splicing TAS
Traceable Author Statement
more info
 PubMed 
involved_in cellular response to type II interferon IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in mRNA splicing, via spliceosome IC
Inferred by Curator
more info
 PubMed 
involved_in negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in negative regulation of translation IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in negative regulation of translation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in osteoblast differentiation HDA PubMed 
involved_in positive regulation of cytoplasmic translation IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
part_of CRD-mediated mRNA stability complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of CRD-mediated mRNA stability complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of CRD-mediated mRNA stability complex IPI
Inferred from Physical Interaction
more info
 PubMed 
part_of GAIT complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of catalytic step 2 spliceosome IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
part_of histone pre-mRNA 3'end processing complex ISS
Inferred from Sequence or Structural Similarity
more info
  
part_of mCRD-mediated mRNA stability complex IPI
Inferred from Physical Interaction
more info
 PubMed 
located_in membrane HDA PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of ribonucleoprotein complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of ribonucleoprotein complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoprotein Q
Names
NS1-associated protein 1
glycine- and tyrosine-rich RNA-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_031848.1 RefSeqGene

    Range
    5440..34350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001159673.2 → NP_001153145.1  heterogeneous nuclear ribonucleoprotein Q isoform 2

    See identical proteins and their annotated locations for NP_001153145.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR, 3' UTR, and coding region and initiates translation at an alternate in-frame start codon, compared to variant 1. The resulting isoform (2) is shorter and has distinct N- and C-termini, compared to isoform 1.
    Source sequence(s)
    AB209098, AF037448, AL136082, BF221524
    Consensus CDS
    CCDS75491.1
    UniProtKB/TrEMBL
    B7Z645, Q59GL1
    Related
    ENSP00000484577.1, ENST00000616122.5
    Conserved Domains (1) summary
    TIGR01648
    Location:5 → 459
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  2. NM_001159674.2 → NP_001153146.1  heterogeneous nuclear ribonucleoprotein Q isoform 3

    See identical proteins and their annotated locations for NP_001153146.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR, 3' UTR, and coding region compared to variant 1. The resulting isoform (3) is shorter and has a distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AB209098, AF037448, AL136082, BC032643, BF221524
    UniProtKB/TrEMBL
    A0A7I2V4Z0
    Conserved Domains (2) summary
    TIGR01648
    Location:103 → 522
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    cd21066
    Location:23 → 107
    NURR_hnRNPQ; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein Q (hnRNPQ) and similar proteins

  3. NM_001159675.1 → NP_001153147.1  heterogeneous nuclear ribonucleoprotein Q isoform 4

    See identical proteins and their annotated locations for NP_001153147.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) differs in the 5' UTR and coding region compared to variant 1. The resulting isoform (4) is shorter, compared to isoform 1.
    Source sequence(s)
    AL136082, AY034482, BC015575, DB160837
    Consensus CDS
    CCDS93967.1
    UniProtKB/TrEMBL
    B2R8Z8
    Related
    ENSP00000504120.1, ENST00000678930.1
    Conserved Domains (2) summary
    TIGR01648
    Location:103 → 580
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    cd21066
    Location:23 → 107
    NURR_hnRNPQ; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein Q (hnRNPQ) and similar proteins

  4. NM_001159676.1 → NP_001153148.1  heterogeneous nuclear ribonucleoprotein Q isoform 5

    See identical proteins and their annotated locations for NP_001153148.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (5) differs in the 5' UTR, 3' UTR, and coding region compared to variant 1. The resulting isoform (5) is shorter and has a distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AB209098, AL136082, AY034483, BC015575, BF221524
    Consensus CDS
    CCDS93966.1
    UniProtKB/TrEMBL
    A0A7I2V4Z0, A0A7I2YQN2
    Conserved Domains (2) summary
    TIGR01648
    Location:103 → 553
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    cd21066
    Location:23 → 107
    NURR_hnRNPQ; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein Q (hnRNPQ) and similar proteins

  5. NM_001159677.2 → NP_001153149.1  heterogeneous nuclear ribonucleoprotein Q isoform 6

    See identical proteins and their annotated locations for NP_001153149.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (6) differs in the 3' UTR and coding region compared to variant 1. The resulting isoform (6) is shorter and has a distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AB209098, AF155568, AL136082, BF221524
    Consensus CDS
    CCDS55041.1
    UniProtKB/TrEMBL
    A0A7I2V4Z0
    Related
    ENSP00000347380.6, ENST00000355238.11
    Conserved Domains (2) summary
    TIGR01648
    Location:103 → 557
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    cd21066
    Location:23 → 107
    NURR_hnRNPQ; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein Q (hnRNPQ) and similar proteins

  6. NM_001253771.2 → NP_001240700.1  heterogeneous nuclear ribonucleoprotein Q isoform 7

    See identical proteins and their annotated locations for NP_001240700.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (7) differs in the 3' UTR, lacks an internal exon, uses an alternate splice site in the coding region and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (7) is shorter and has distinct N- and C-termini, compared to isoform 1.
    Source sequence(s)
    AA411631, AB209098, BC040844, BF221524, CV806885
    UniProtKB/Swiss-Prot
    O60506
    UniProtKB/TrEMBL
    Q59GL1
    Conserved Domains (1) summary
    TIGR01648
    Location:11 → 405
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  7. NM_001410938.1 → NP_001397867.1  heterogeneous nuclear ribonucleoprotein Q isoform 8

    Status: REVIEWED

    Source sequence(s)
    AL136082
    Consensus CDS
    CCDS93965.1
    UniProtKB/TrEMBL
    A0A7I2V309
    Related
    ENSP00000503183.1, ENST00000678899.1

  8. NM_006372.5 → NP_006363.4  heterogeneous nuclear ribonucleoprotein Q isoform 1

    See identical proteins and their annotated locations for NP_006363.4

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (1).
    Source sequence(s)
    AF037448, AL136082, DA117533, DB160837
    Consensus CDS
    CCDS5005.1
    UniProtKB/Swiss-Prot
    E1P501, E1P502, O60506, Q53H05, Q5TCG2, Q5TCG3, Q8IW78, Q8N599, Q96LC1, Q96LC2, Q9Y583
    UniProtKB/TrEMBL
    B2R8Z8
    Related
    ENSP00000358635.3, ENST00000369622.8
    Conserved Domains (2) summary
    TIGR01648
    Location:103 → 615
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    cd21066
    Location:23 → 107
    NURR_hnRNPQ; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein Q (hnRNPQ) and similar proteins

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    85607784..85643870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017010179.2 → XP_016865668.1  heterogeneous nuclear ribonucleoprotein Q isoform X5

    UniProtKB/TrEMBL
    A0A7I2V4Z0, A0A7I2YQN2
    Related
    ENSP00000504816.1, ENST00000677771.1
    Conserved Domains (2) summary
    TIGR01648
    Location:103 → 553
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    cd21066
    Location:23 → 107
    NURR_hnRNPQ; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein Q (hnRNPQ) and similar proteins

  2. XM_017010178.3 → XP_016865667.1  heterogeneous nuclear ribonucleoprotein Q isoform X4

    UniProtKB/TrEMBL
    A0A7I2V4Z0
    Related
    ENSP00000503246.1, ENST00000678528.1
    Conserved Domains (2) summary
    TIGR01648
    Location:103 → 557
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    cd21066
    Location:23 → 107
    NURR_hnRNPQ; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein Q (hnRNPQ) and similar proteins

  3. XM_047418082.1 → XP_047274038.1  heterogeneous nuclear ribonucleoprotein Q isoform X3

  4. XM_047418081.1 → XP_047274037.1  heterogeneous nuclear ribonucleoprotein Q isoform X2

  5. XM_047418083.1 → XP_047274039.1  heterogeneous nuclear ribonucleoprotein Q isoform X6

  6. XM_005248635.5 → XP_005248692.1  heterogeneous nuclear ribonucleoprotein Q isoform X5

    See identical proteins and their annotated locations for XP_005248692.1

    UniProtKB/TrEMBL
    A0A7I2V4Z0, A0A7I2YQN2
    Related
    ENSP00000504086.1, ENST00000678878.1
    Conserved Domains (2) summary
    TIGR01648
    Location:103 → 553
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    cd21066
    Location:23 → 107
    NURR_hnRNPQ; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein Q (hnRNPQ) and similar proteins

  7. XM_017010177.2 → XP_016865666.1  heterogeneous nuclear ribonucleoprotein Q isoform X3

    UniProtKB/TrEMBL
    B2R8Z8
    Conserved Domains (2) summary
    TIGR01648
    Location:103 → 592
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    cd21066
    Location:23 → 107
    NURR_hnRNPQ; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein Q (hnRNPQ) and similar proteins

  8. XM_017010176.2 → XP_016865665.1  heterogeneous nuclear ribonucleoprotein Q isoform X2

    UniProtKB/TrEMBL
    B2R8Z8
    Conserved Domains (2) summary
    TIGR01648
    Location:103 → 592
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    cd21066
    Location:23 → 107
    NURR_hnRNPQ; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein Q (hnRNPQ) and similar proteins

  9. XM_005248637.3 → XP_005248694.1  heterogeneous nuclear ribonucleoprotein Q isoform X1

    See identical proteins and their annotated locations for XP_005248694.1

    UniProtKB/Swiss-Prot
    E1P501, E1P502, O60506, Q53H05, Q5TCG2, Q5TCG3, Q8IW78, Q8N599, Q96LC1, Q96LC2, Q9Y583
    UniProtKB/TrEMBL
    B2R8Z8
    Related
    ENSP00000504706.1, ENST00000676688.1
    Conserved Domains (2) summary
    TIGR01648
    Location:103 → 615
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    cd21066
    Location:23 → 107
    NURR_hnRNPQ; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein Q (hnRNPQ) and similar proteins

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    86824588..86863388 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054354042.1 → XP_054210017.1  heterogeneous nuclear ribonucleoprotein Q isoform X5

    UniProtKB/TrEMBL
    A0A7I2YQN2

  2. XM_054354040.1 → XP_054210015.1  heterogeneous nuclear ribonucleoprotein Q isoform X4

  3. XM_054354039.1 → XP_054210014.1  heterogeneous nuclear ribonucleoprotein Q isoform X3

  4. XM_054354037.1 → XP_054210012.1  heterogeneous nuclear ribonucleoprotein Q isoform X2

  5. XM_054354043.1 → XP_054210018.1  heterogeneous nuclear ribonucleoprotein Q isoform X6

  6. XM_054354041.1 → XP_054210016.1  heterogeneous nuclear ribonucleoprotein Q isoform X5

    UniProtKB/TrEMBL
    A0A7I2YQN2

  7. XM_054354038.1 → XP_054210013.1  heterogeneous nuclear ribonucleoprotein Q isoform X3

  8. XM_054354036.1 → XP_054210011.1  heterogeneous nuclear ribonucleoprotein Q isoform X2

  9. XM_054354035.1 → XP_054210010.1  heterogeneous nuclear ribonucleoprotein Q isoform X1

    UniProtKB/Swiss-Prot
    E1P501, E1P502, O60506, Q53H05, Q5TCG2, Q5TCG3, Q8IW78, Q8N599, Q96LC1, Q96LC2, Q9Y583
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O60506.2 GenPept UniProtKB/Swiss-Prot:O60506

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