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CD109 CD109 molecule [ Fulmarus glacialis (Northern fulmar) ]

Gene ID: 104073227, updated on 3-Aug-2024

Summary

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Gene symbol
CD109
Gene description
CD109 molecule
Locus tag
N327_00821
Gene type
protein coding
RefSeq status
MODEL
Organism
Fulmarus glacialis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Procellariidae; Fulmarus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See CD109 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM69083v1 (GCF_000690835.1) Unplaced Scaffold NW_009198505.1 (46834..83324, complement)

NW_009198505.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009198505.1 Unplaced Scaffold Reference ASM69083v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD109 antigen

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fulmarus glacialis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69083v1

Genomic

  1. NW_009198505.1 Reference ASM69083v1

    Range
    46834..83324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009572927.1 → XP_009571222.1  CD109 antigen

    UniProtKB/TrEMBL
    A0A093ILI7
    Conserved Domains (5) summary
    cd02897
    Location:372 → 659
    A2M_2; Proteins similar to alpha2-macroglobulin (alpha (2)-M). This group also contains the pregnancy zone protein (PZP). Alpha(2)-M and PZP are broadly specific proteinase inhibitors. Alpha (2)-M is a major carrier protein in serum. The structural thioester ...
    pfam00207
    Location:158 → 249
    A2M; Alpha-2-macroglobulin family
    pfam07677
    Location:777 → 855
    A2M_recep; A-macroglobulin receptor
    pfam07678
    Location:424 → 661
    A2M_comp; A-macroglobulin complement component
    pfam07703
    Location:22 → 62
    A2M_N_2; Alpha-2-macroglobulin family N-terminal region
Nucleotide Protein
Heading Accession and Version

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