U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PIGV phosphatidylinositol glycan anchor biosynthesis class V [ Alligator mississippiensis (American alligator) ]

Gene ID: 102577076, updated on 8-May-2024

Summary

Go to the top of the page Help
Gene symbol
PIGV
Gene description
phosphatidylinositol glycan anchor biosynthesis class V
Locus tag
Y1Q_0023076
See related
EnsemblRapid:ENSAMIG00015020218
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 6 NC_081829.1 (2853173..2861644, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017710296.1 (269152..277707)

Chromosome 6 - NC_081829.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 18 Neighboring gene stratifin Neighboring gene AT-rich interaction domain 1A Neighboring gene uncharacterized LOC102557727

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
GPI mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081829.1 Reference rAllMis1 Primary Assembly

    Range
    2853173..2861644 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059729506.1 → XP_059585489.1  GPI mannosyltransferase 2 isoform X2

  2. XM_006270203.4 → XP_006270265.1  GPI mannosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A151NJT3
    Related
    ENSAMIP00015027840.1, ENSAMIT00015038453.1
    Conserved Domains (1) summary
    cl21590
    Location:12 → 523
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_014610512.3 → XP_014465998.1  GPI mannosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A151NJT3
    Conserved Domains (1) summary
    cl21590
    Location:12 → 523
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

RNA

  1. XR_009462911.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.